Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RC3H1Q5TC82 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC24.48■■□□□ 1.51
RC3H1Q5TC82 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RC3H1Q5TC82 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
RC3H1Q5TC82 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC24.48■■□□□ 1.51
RC3H1Q5TC82 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC24.48■■□□□ 1.51
RC3H1Q5TC82 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC24.48■■□□□ 1.51
RC3H1Q5TC82 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC24.48■■□□□ 1.51
RC3H1Q5TC82 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC24.48■■□□□ 1.51
RC3H1Q5TC82 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC24.48■■□□□ 1.51
RC3H1Q5TC82 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC24.48■■□□□ 1.51
RC3H1Q5TC82 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
RC3H1Q5TC82 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
RC3H1Q5TC82 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RC3H1Q5TC82 ANKRD18DP-204ENST00000455355 1975 ntBASIC24.47■■□□□ 1.51
RC3H1Q5TC82 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RC3H1Q5TC82 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC24.47■■□□□ 1.51
RC3H1Q5TC82 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RC3H1Q5TC82 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC24.47■■□□□ 1.51
RC3H1Q5TC82 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RC3H1Q5TC82 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RC3H1Q5TC82 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RC3H1Q5TC82 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RC3H1Q5TC82 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC24.47■■□□□ 1.51
RC3H1Q5TC82 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC24.47■■□□□ 1.51
RC3H1Q5TC82 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RC3H1Q5TC82 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC24.47■■□□□ 1.51
RC3H1Q5TC82 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC24.47■■□□□ 1.51
RC3H1Q5TC82 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
RC3H1Q5TC82 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
RC3H1Q5TC82 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RC3H1Q5TC82 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
RC3H1Q5TC82 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
RC3H1Q5TC82 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC24.47■■□□□ 1.51
RC3H1Q5TC82 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RC3H1Q5TC82 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC24.46■■□□□ 1.51
RC3H1Q5TC82 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
RC3H1Q5TC82 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RC3H1Q5TC82 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RC3H1Q5TC82 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
RC3H1Q5TC82 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RC3H1Q5TC82 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RC3H1Q5TC82 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
RC3H1Q5TC82 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC24.46■■□□□ 1.51
RC3H1Q5TC82 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC24.46■■□□□ 1.51
RC3H1Q5TC82 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
RC3H1Q5TC82 CR769767.2-201ENST00000622735 460 ntBASIC24.46■■□□□ 1.51
RC3H1Q5TC82 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
RC3H1Q5TC82 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
RC3H1Q5TC82 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC24.46■■□□□ 1.51
RC3H1Q5TC82 TBC1D3P2-202ENST00000577902 1649 ntBASIC24.46■■□□□ 1.51
RC3H1Q5TC82 AC009237.14-201ENST00000609975 1594 ntBASIC24.46■■□□□ 1.51
RC3H1Q5TC82 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC24.45■■□□□ 1.5
RC3H1Q5TC82 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC24.45■■□□□ 1.5
RC3H1Q5TC82 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
RC3H1Q5TC82 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RC3H1Q5TC82 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC24.45■■□□□ 1.5
RC3H1Q5TC82 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RC3H1Q5TC82 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RC3H1Q5TC82 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RC3H1Q5TC82 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC24.45■■□□□ 1.5
RC3H1Q5TC82 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC24.45■■□□□ 1.5
RC3H1Q5TC82 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC24.45■■□□□ 1.5
RC3H1Q5TC82 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RC3H1Q5TC82 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RC3H1Q5TC82 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RC3H1Q5TC82 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RC3H1Q5TC82 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RC3H1Q5TC82 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RC3H1Q5TC82 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RC3H1Q5TC82 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RC3H1Q5TC82 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RC3H1Q5TC82 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
RC3H1Q5TC82 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC24.44■■□□□ 1.5
RC3H1Q5TC82 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
RC3H1Q5TC82 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
RC3H1Q5TC82 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
RC3H1Q5TC82 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
RC3H1Q5TC82 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC24.44■■□□□ 1.5
RC3H1Q5TC82 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC24.43■■□□□ 1.5
RC3H1Q5TC82 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RC3H1Q5TC82 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC24.43■■□□□ 1.5
RC3H1Q5TC82 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
RC3H1Q5TC82 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
RC3H1Q5TC82 STK25-234ENST00000535007 2459 ntTSL 2 BASIC24.43■■□□□ 1.5
RC3H1Q5TC82 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC24.43■■□□□ 1.5
RC3H1Q5TC82 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC24.43■■□□□ 1.5
RC3H1Q5TC82 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RC3H1Q5TC82 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
RC3H1Q5TC82 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RC3H1Q5TC82 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC24.43■■□□□ 1.5
RC3H1Q5TC82 AL645929.1-201ENST00000420084 975 ntBASIC24.43■■□□□ 1.5
RC3H1Q5TC82 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC24.43■■□□□ 1.5
RC3H1Q5TC82 SKP2-204ENST00000508514 821 ntTSL 3 BASIC24.43■■□□□ 1.5
RC3H1Q5TC82 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC24.43■■□□□ 1.5
RC3H1Q5TC82 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RC3H1Q5TC82 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RC3H1Q5TC82 AC092119.3-201ENST00000612618 583 ntBASIC24.43■■□□□ 1.5
RC3H1Q5TC82 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RC3H1Q5TC82 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms