Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC6A12P48065 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC6A12P48065 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SLC6A12P48065 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC6A12P48065 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SLC6A12P48065 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SLC6A12P48065 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC6A12P48065 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SLC6A12P48065 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC6A12P48065 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SLC6A12P48065 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC6A12P48065 AP000974.1-201ENST00000623909 2387 ntBASIC18.73■□□□□ 0.59
SLC6A12P48065 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC6A12P48065 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC6A12P48065 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
SLC6A12P48065 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC6A12P48065 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC6A12P48065 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC6A12P48065 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC6A12P48065 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC6A12P48065 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.72■□□□□ 0.59
SLC6A12P48065 KRT16P5-201ENST00000455284 522 ntBASIC18.72■□□□□ 0.59
SLC6A12P48065 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC6A12P48065 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
SLC6A12P48065 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC6A12P48065 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC6A12P48065 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC6A12P48065 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC6A12P48065 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC6A12P48065 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SLC6A12P48065 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC6A12P48065 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
SLC6A12P48065 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC6A12P48065 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC6A12P48065 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC6A12P48065 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SLC6A12P48065 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SLC6A12P48065 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC6A12P48065 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SLC6A12P48065 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC6A12P48065 LINC01465-201ENST00000408887 1940 ntBASIC18.71■□□□□ 0.59
SLC6A12P48065 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC6A12P48065 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC6A12P48065 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC6A12P48065 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC6A12P48065 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC6A12P48065 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC6A12P48065 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC6A12P48065 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC6A12P48065 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.71■□□□□ 0.59
SLC6A12P48065 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.71■□□□□ 0.59
SLC6A12P48065 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC6A12P48065 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC6A12P48065 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC6A12P48065 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SLC6A12P48065 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SLC6A12P48065 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.71■□□□□ 0.59
SLC6A12P48065 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SLC6A12P48065 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC6A12P48065 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC6A12P48065 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SLC6A12P48065 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
SLC6A12P48065 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC6A12P48065 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC6A12P48065 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.71■□□□□ 0.59
SLC6A12P48065 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SLC6A12P48065 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.71■□□□□ 0.59
SLC6A12P48065 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
SLC6A12P48065 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SLC6A12P48065 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC6A12P48065 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.7■□□□□ 0.58
SLC6A12P48065 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.7■□□□□ 0.58
SLC6A12P48065 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SLC6A12P48065 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
SLC6A12P48065 AC087289.5-201ENST00000586076 3175 ntBASIC18.7■□□□□ 0.58
SLC6A12P48065 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC6A12P48065 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.7■□□□□ 0.58
SLC6A12P48065 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.7■□□□□ 0.58
SLC6A12P48065 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.7■□□□□ 0.58
SLC6A12P48065 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.7■□□□□ 0.58
SLC6A12P48065 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC6A12P48065 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SLC6A12P48065 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC6A12P48065 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC6A12P48065 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC6A12P48065 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
SLC6A12P48065 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC6A12P48065 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC6A12P48065 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SLC6A12P48065 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC6A12P48065 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SLC6A12P48065 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC6A12P48065 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC6A12P48065 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC6A12P48065 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC6A12P48065 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SLC6A12P48065 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC6A12P48065 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC6A12P48065 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.69■□□□□ 0.58
SLC6A12P48065 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms