Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.58■□□□□ 0.72
RPA3P35244 AC009113.1-201ENST00000570267 2443 ntBASIC19.58■□□□□ 0.72
RPA3P35244 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
RPA3P35244 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RPA3P35244 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RPA3P35244 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPA3P35244 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPA3P35244 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RPA3P35244 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RPA3P35244 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPA3P35244 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPA3P35244 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RPA3P35244 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RPA3P35244 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RPA3P35244 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPA3P35244 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.57■□□□□ 0.72
RPA3P35244 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPA3P35244 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RPA3P35244 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPA3P35244 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RPA3P35244 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPA3P35244 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RPA3P35244 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPA3P35244 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.57■□□□□ 0.72
RPA3P35244 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RPA3P35244 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.57■□□□□ 0.72
RPA3P35244 DUSP5P2-201ENST00000426873 1033 ntBASIC19.57■□□□□ 0.72
RPA3P35244 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.57■□□□□ 0.72
RPA3P35244 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.57■□□□□ 0.72
RPA3P35244 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.57■□□□□ 0.72
RPA3P35244 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
RPA3P35244 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RPA3P35244 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPA3P35244 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RPA3P35244 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPA3P35244 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPA3P35244 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RPA3P35244 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPA3P35244 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RPA3P35244 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RPA3P35244 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
RPA3P35244 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPA3P35244 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPA3P35244 AC006333.2-201ENST00000607957 2099 ntBASIC19.56■□□□□ 0.72
RPA3P35244 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RPA3P35244 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.56■□□□□ 0.72
RPA3P35244 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPA3P35244 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPA3P35244 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RPA3P35244 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.56■□□□□ 0.72
RPA3P35244 PHGDH-210ENST00000641115 1638 ntBASIC19.56■□□□□ 0.72
RPA3P35244 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RPA3P35244 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPA3P35244 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.56■□□□□ 0.72
RPA3P35244 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.56■□□□□ 0.72
RPA3P35244 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.56■□□□□ 0.72
RPA3P35244 C2orf69P4-201ENST00000565394 541 ntBASIC19.56■□□□□ 0.72
RPA3P35244 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.56■□□□□ 0.72
RPA3P35244 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.56■□□□□ 0.72
RPA3P35244 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.56■□□□□ 0.72
RPA3P35244 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
RPA3P35244 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.56■□□□□ 0.72
RPA3P35244 AC133041.1-202ENST00000642053 222 ntBASIC19.56■□□□□ 0.72
RPA3P35244 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPA3P35244 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.56■□□□□ 0.72
RPA3P35244 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RPA3P35244 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPA3P35244 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPA3P35244 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RPA3P35244 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
RPA3P35244 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RPA3P35244 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPA3P35244 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPA3P35244 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPA3P35244 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPA3P35244 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.55■□□□□ 0.72
RPA3P35244 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPA3P35244 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPA3P35244 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPA3P35244 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPA3P35244 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RPA3P35244 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPA3P35244 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPA3P35244 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPA3P35244 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.55■□□□□ 0.72
RPA3P35244 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RPA3P35244 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RPA3P35244 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.55■□□□□ 0.72
RPA3P35244 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.55■□□□□ 0.72
RPA3P35244 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RPA3P35244 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.55■□□□□ 0.72
RPA3P35244 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RPA3P35244 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RPA3P35244 AC142086.2-201ENST00000569753 217 ntBASIC19.55■□□□□ 0.72
RPA3P35244 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.55■□□□□ 0.72
RPA3P35244 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RPA3P35244 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPA3P35244 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPA3P35244 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPA3P35244 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 221 ms