Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 MMP23A-201ENST00000234610 1017 ntBASIC19.94■□□□□ 0.78
SLC6A4P31645 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SLC6A4P31645 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SLC6A4P31645 AC091390.4-202ENST00000476426 537 ntBASIC19.94■□□□□ 0.78
SLC6A4P31645 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.94■□□□□ 0.78
SLC6A4P31645 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.94■□□□□ 0.78
SLC6A4P31645 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC6A4P31645 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC6A4P31645 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SLC6A4P31645 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.94■□□□□ 0.78
SLC6A4P31645 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC6A4P31645 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.94■□□□□ 0.78
SLC6A4P31645 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC6A4P31645 AFG3L1P-217ENST00000557444 2447 ntBASIC19.94■□□□□ 0.78
SLC6A4P31645 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC6A4P31645 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SLC6A4P31645 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC6A4P31645 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.93■□□□□ 0.78
SLC6A4P31645 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.93■□□□□ 0.78
SLC6A4P31645 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.93■□□□□ 0.78
SLC6A4P31645 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
SLC6A4P31645 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC6A4P31645 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.93■□□□□ 0.78
SLC6A4P31645 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SLC6A4P31645 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC6A4P31645 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.93■□□□□ 0.78
SLC6A4P31645 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SLC6A4P31645 AC004951.3-201ENST00000418645 1148 ntBASIC19.93■□□□□ 0.78
SLC6A4P31645 ECEL1P3-201ENST00000427961 737 ntBASIC19.93■□□□□ 0.78
SLC6A4P31645 FITM1-202ENST00000559294 800 ntBASIC19.93■□□□□ 0.78
SLC6A4P31645 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.93■□□□□ 0.78
SLC6A4P31645 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.93■□□□□ 0.78
SLC6A4P31645 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
SLC6A4P31645 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SLC6A4P31645 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.93■□□□□ 0.78
SLC6A4P31645 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.93■□□□□ 0.78
SLC6A4P31645 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC6A4P31645 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.93■□□□□ 0.78
SLC6A4P31645 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.93■□□□□ 0.78
SLC6A4P31645 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.93■□□□□ 0.78
SLC6A4P31645 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLC6A4P31645 AC104417.2-201ENST00000562989 1793 ntBASIC19.93■□□□□ 0.78
SLC6A4P31645 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC6A4P31645 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC6A4P31645 KRT8P41-201ENST00000533985 1514 ntBASIC19.92■□□□□ 0.78
SLC6A4P31645 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC6A4P31645 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.92■□□□□ 0.78
SLC6A4P31645 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.92■□□□□ 0.78
SLC6A4P31645 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC6A4P31645 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SLC6A4P31645 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC6A4P31645 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC6A4P31645 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC6A4P31645 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.92■□□□□ 0.78
SLC6A4P31645 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SLC6A4P31645 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.92■□□□□ 0.78
SLC6A4P31645 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC6A4P31645 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC6A4P31645 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC6A4P31645 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC6A4P31645 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC6A4P31645 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC6A4P31645 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SLC6A4P31645 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.92■□□□□ 0.78
SLC6A4P31645 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC6A4P31645 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.92■□□□□ 0.78
SLC6A4P31645 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC6A4P31645 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.92■□□□□ 0.78
SLC6A4P31645 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC6A4P31645 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.92■□□□□ 0.78
SLC6A4P31645 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
SLC6A4P31645 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC6A4P31645 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.91■□□□□ 0.78
SLC6A4P31645 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.91■□□□□ 0.78
SLC6A4P31645 ZNF815P-204ENST00000434898 1737 ntBASIC19.91■□□□□ 0.78
SLC6A4P31645 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC6A4P31645 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC6A4P31645 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC6A4P31645 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.91■□□□□ 0.78
SLC6A4P31645 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.91■□□□□ 0.78
SLC6A4P31645 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.91■□□□□ 0.78
SLC6A4P31645 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.91■□□□□ 0.78
SLC6A4P31645 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.91■□□□□ 0.78
SLC6A4P31645 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.91■□□□□ 0.78
SLC6A4P31645 DGCR10-201ENST00000609839 495 ntBASIC19.91■□□□□ 0.78
SLC6A4P31645 AC133561.5-201ENST00000635547 218 ntBASIC19.91■□□□□ 0.78
SLC6A4P31645 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC6A4P31645 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.91■□□□□ 0.78
SLC6A4P31645 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SLC6A4P31645 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC6A4P31645 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.91■□□□□ 0.78
SLC6A4P31645 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SLC6A4P31645 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.9■□□□□ 0.78
SLC6A4P31645 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.9■□□□□ 0.78
SLC6A4P31645 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.9■□□□□ 0.78
SLC6A4P31645 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.9■□□□□ 0.78
SLC6A4P31645 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.9■□□□□ 0.78
SLC6A4P31645 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC6A4P31645 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.9■□□□□ 0.78
SLC6A4P31645 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms