Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ABCD3P28288 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCD3P28288 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCD3P28288 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCD3P28288 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ABCD3P28288 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCD3P28288 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.88■□□□□ 0.45
ABCD3P28288 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.88■□□□□ 0.45
ABCD3P28288 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.88■□□□□ 0.45
ABCD3P28288 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.88■□□□□ 0.45
ABCD3P28288 AC113410.3-201ENST00000623366 203 ntBASIC17.88■□□□□ 0.45
ABCD3P28288 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCD3P28288 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCD3P28288 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCD3P28288 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ABCD3P28288 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.88■□□□□ 0.45
ABCD3P28288 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCD3P28288 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ABCD3P28288 KRT16P1-201ENST00000399124 1418 ntBASIC17.88■□□□□ 0.45
ABCD3P28288 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.88■□□□□ 0.45
ABCD3P28288 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCD3P28288 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.87■□□□□ 0.45
ABCD3P28288 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ABCD3P28288 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.87■□□□□ 0.45
ABCD3P28288 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ABCD3P28288 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.87■□□□□ 0.45
ABCD3P28288 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ABCD3P28288 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ABCD3P28288 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
ABCD3P28288 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
ABCD3P28288 FAM197Y1-201ENST00000421178 764 ntBASIC17.87■□□□□ 0.45
ABCD3P28288 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.87■□□□□ 0.45
ABCD3P28288 CD177P1-201ENST00000606252 935 ntBASIC17.87■□□□□ 0.45
ABCD3P28288 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.87■□□□□ 0.45
ABCD3P28288 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.87■□□□□ 0.45
ABCD3P28288 CR392000.1-201ENST00000624770 1228 ntBASIC17.87■□□□□ 0.45
ABCD3P28288 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.87■□□□□ 0.45
ABCD3P28288 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
ABCD3P28288 AC007952.6-201ENST00000573168 2673 ntBASIC17.87■□□□□ 0.45
ABCD3P28288 AC003957.1-201ENST00000625108 2673 ntBASIC17.87■□□□□ 0.45
ABCD3P28288 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ABCD3P28288 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
ABCD3P28288 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ABCD3P28288 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ABCD3P28288 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.86■□□□□ 0.45
ABCD3P28288 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
ABCD3P28288 LINC01465-201ENST00000408887 1940 ntBASIC17.86■□□□□ 0.45
ABCD3P28288 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.86■□□□□ 0.45
ABCD3P28288 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
ABCD3P28288 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ABCD3P28288 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ABCD3P28288 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.86■□□□□ 0.45
ABCD3P28288 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ABCD3P28288 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
ABCD3P28288 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.86■□□□□ 0.45
ABCD3P28288 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.86■□□□□ 0.45
ABCD3P28288 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.86■□□□□ 0.45
ABCD3P28288 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.86■□□□□ 0.45
ABCD3P28288 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
ABCD3P28288 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ABCD3P28288 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.86■□□□□ 0.45
ABCD3P28288 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ABCD3P28288 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ABCD3P28288 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ABCD3P28288 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ABCD3P28288 ZNF815P-204ENST00000434898 1737 ntBASIC17.86■□□□□ 0.45
ABCD3P28288 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
ABCD3P28288 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.86■□□□□ 0.45
ABCD3P28288 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ABCD3P28288 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
ABCD3P28288 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ABCD3P28288 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ABCD3P28288 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ABCD3P28288 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ABCD3P28288 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ABCD3P28288 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ABCD3P28288 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
ABCD3P28288 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
ABCD3P28288 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.85■□□□□ 0.45
ABCD3P28288 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.85■□□□□ 0.45
ABCD3P28288 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.85■□□□□ 0.45
ABCD3P28288 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
ABCD3P28288 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ABCD3P28288 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.85■□□□□ 0.45
ABCD3P28288 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.85■□□□□ 0.45
ABCD3P28288 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.85■□□□□ 0.45
ABCD3P28288 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.85■□□□□ 0.45
ABCD3P28288 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.85■□□□□ 0.45
ABCD3P28288 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
ABCD3P28288 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ABCD3P28288 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.85■□□□□ 0.45
ABCD3P28288 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ABCD3P28288 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.84■□□□□ 0.45
ABCD3P28288 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.84■□□□□ 0.45
ABCD3P28288 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.84■□□□□ 0.45
ABCD3P28288 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.84■□□□□ 0.45
ABCD3P28288 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
ABCD3P28288 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.84■□□□□ 0.45
ABCD3P28288 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.84■□□□□ 0.45
ABCD3P28288 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms