Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SRFP11831 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SRFP11831 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SRFP11831 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SRFP11831 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SRFP11831 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRFP11831 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.67■□□□□ 0.74
SRFP11831 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SRFP11831 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRFP11831 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SRFP11831 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRFP11831 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRFP11831 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.67■□□□□ 0.74
SRFP11831 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.67■□□□□ 0.74
SRFP11831 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRFP11831 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRFP11831 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SRFP11831 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRFP11831 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SRFP11831 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.66■□□□□ 0.74
SRFP11831 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.66■□□□□ 0.74
SRFP11831 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SRFP11831 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SRFP11831 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.66■□□□□ 0.74
SRFP11831 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.66■□□□□ 0.74
SRFP11831 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
SRFP11831 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
SRFP11831 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.66■□□□□ 0.74
SRFP11831 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.66■□□□□ 0.74
SRFP11831 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SRFP11831 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.66■□□□□ 0.74
SRFP11831 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SRFP11831 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.66■□□□□ 0.74
SRFP11831 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.66■□□□□ 0.74
SRFP11831 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SRFP11831 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.66■□□□□ 0.74
SRFP11831 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SRFP11831 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
SRFP11831 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SRFP11831 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SRFP11831 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRFP11831 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.65■□□□□ 0.74
SRFP11831 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SRFP11831 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SRFP11831 FEM1AP1-201ENST00000431297 1995 ntBASIC19.65■□□□□ 0.74
SRFP11831 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRFP11831 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRFP11831 AL845331.1-201ENST00000424978 1190 ntBASIC19.65■□□□□ 0.74
SRFP11831 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SRFP11831 FAAHP1-202ENST00000446499 1238 ntBASIC19.65■□□□□ 0.74
SRFP11831 TSSC2-201ENST00000450217 709 ntBASIC19.65■□□□□ 0.74
SRFP11831 AC034232.1-201ENST00000506026 1064 ntBASIC19.65■□□□□ 0.74
SRFP11831 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.65■□□□□ 0.74
SRFP11831 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.65■□□□□ 0.74
SRFP11831 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SRFP11831 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.65■□□□□ 0.74
SRFP11831 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRFP11831 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRFP11831 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SRFP11831 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRFP11831 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.65■□□□□ 0.74
SRFP11831 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRFP11831 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRFP11831 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.65■□□□□ 0.74
SRFP11831 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.64■□□□□ 0.74
SRFP11831 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
SRFP11831 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
SRFP11831 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SRFP11831 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SRFP11831 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SRFP11831 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SRFP11831 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.64■□□□□ 0.73
SRFP11831 KRT17P6-201ENST00000453795 1220 ntBASIC19.64■□□□□ 0.73
SRFP11831 RASA4DP-201ENST00000460726 1199 ntBASIC19.64■□□□□ 0.73
SRFP11831 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.64■□□□□ 0.73
SRFP11831 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.64■□□□□ 0.73
SRFP11831 MIR4674-201ENST00000582457 87 ntBASIC19.64■□□□□ 0.73
SRFP11831 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SRFP11831 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
SRFP11831 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.64■□□□□ 0.73
SRFP11831 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.64■□□□□ 0.73
SRFP11831 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SRFP11831 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SRFP11831 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SRFP11831 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.64■□□□□ 0.73
SRFP11831 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.64■□□□□ 0.73
SRFP11831 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
SRFP11831 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.64■□□□□ 0.73
SRFP11831 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SRFP11831 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.64■□□□□ 0.73
SRFP11831 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SRFP11831 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SRFP11831 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.63■□□□□ 0.73
SRFP11831 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.63■□□□□ 0.73
SRFP11831 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.63■□□□□ 0.73
SRFP11831 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SRFP11831 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.63■□□□□ 0.73
SRFP11831 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.63■□□□□ 0.73
SRFP11831 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
SRFP11831 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms