Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SRGAP2CP0DJJ0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SRGAP2CP0DJJ0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SRGAP2CP0DJJ0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.34■■□□□ 1.01
SRGAP2CP0DJJ0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.34■■□□□ 1.01
SRGAP2CP0DJJ0 Z85996.1-201ENST00000494644 937 ntBASIC21.34■■□□□ 1.01
SRGAP2CP0DJJ0 AC097488.1-201ENST00000507834 756 ntBASIC21.34■■□□□ 1.01
SRGAP2CP0DJJ0 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.34■■□□□ 1.01
SRGAP2CP0DJJ0 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.34■■□□□ 1.01
SRGAP2CP0DJJ0 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
SRGAP2CP0DJJ0 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.34■■□□□ 1.01
SRGAP2CP0DJJ0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SRGAP2CP0DJJ0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.34■■□□□ 1.01
SRGAP2CP0DJJ0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SRGAP2CP0DJJ0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.34■■□□□ 1.01
SRGAP2CP0DJJ0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.34■■□□□ 1.01
SRGAP2CP0DJJ0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SRGAP2CP0DJJ0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.33■■□□□ 1.01
SRGAP2CP0DJJ0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SRGAP2CP0DJJ0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SRGAP2CP0DJJ0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SRGAP2CP0DJJ0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
SRGAP2CP0DJJ0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SRGAP2CP0DJJ0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SRGAP2CP0DJJ0 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SRGAP2CP0DJJ0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.33■■□□□ 1.01
SRGAP2CP0DJJ0 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SRGAP2CP0DJJ0 CRYGFP-201ENST00000418459 633 ntBASIC21.33■■□□□ 1.01
SRGAP2CP0DJJ0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.33■■□□□ 1.01
SRGAP2CP0DJJ0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.33■■□□□ 1.01
SRGAP2CP0DJJ0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.33■■□□□ 1.01
SRGAP2CP0DJJ0 AC012306.2-201ENST00000609350 630 ntBASIC21.33■■□□□ 1.01
SRGAP2CP0DJJ0 AC097493.4-201ENST00000641197 219 ntBASIC21.33■■□□□ 1.01
SRGAP2CP0DJJ0 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
SRGAP2CP0DJJ0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.33■■□□□ 1
SRGAP2CP0DJJ0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.33■■□□□ 1
SRGAP2CP0DJJ0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SRGAP2CP0DJJ0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SRGAP2CP0DJJ0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.33■■□□□ 1
SRGAP2CP0DJJ0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SRGAP2CP0DJJ0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
SRGAP2CP0DJJ0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 AC091390.4-202ENST00000476426 537 ntBASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 SLC25A1P4-201ENST00000567977 778 ntBASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
SRGAP2CP0DJJ0 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.31■■□□□ 1
SRGAP2CP0DJJ0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.31■■□□□ 1
SRGAP2CP0DJJ0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.31■■□□□ 1
SRGAP2CP0DJJ0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.31■■□□□ 1
SRGAP2CP0DJJ0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SRGAP2CP0DJJ0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.31■■□□□ 1
SRGAP2CP0DJJ0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.31■■□□□ 1
SRGAP2CP0DJJ0 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.31■■□□□ 1
SRGAP2CP0DJJ0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SRGAP2CP0DJJ0 DGCR10-201ENST00000609839 495 ntBASIC21.31■■□□□ 1
SRGAP2CP0DJJ0 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SRGAP2CP0DJJ0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SRGAP2CP0DJJ0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.31■■□□□ 1
SRGAP2CP0DJJ0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SRGAP2CP0DJJ0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.31■■□□□ 1
SRGAP2CP0DJJ0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.31■■□□□ 1
SRGAP2CP0DJJ0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.31■■□□□ 1
SRGAP2CP0DJJ0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SRGAP2CP0DJJ0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
SRGAP2CP0DJJ0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.31■■□□□ 1
SRGAP2CP0DJJ0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
SRGAP2CP0DJJ0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SRGAP2CP0DJJ0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SRGAP2CP0DJJ0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SRGAP2CP0DJJ0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms