Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC011298.2-201ENST00000617989 482 ntBASIC23.19■■□□□ 1.3
MBD4O95243 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
MBD4O95243 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC23.19■■□□□ 1.3
MBD4O95243 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
MBD4O95243 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
MBD4O95243 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
MBD4O95243 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC23.19■■□□□ 1.3
MBD4O95243 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
MBD4O95243 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
MBD4O95243 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
MBD4O95243 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
MBD4O95243 MIR1238-201ENST00000408483 83 ntBASIC23.18■■□□□ 1.3
MBD4O95243 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
MBD4O95243 AC004951.3-201ENST00000418645 1148 ntBASIC23.18■■□□□ 1.3
MBD4O95243 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
MBD4O95243 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
MBD4O95243 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC23.18■■□□□ 1.3
MBD4O95243 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC23.18■■□□□ 1.3
MBD4O95243 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
MBD4O95243 AC130371.2-201ENST00000619443 611 ntBASIC23.18■■□□□ 1.3
MBD4O95243 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
MBD4O95243 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC23.18■■□□□ 1.3
MBD4O95243 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
MBD4O95243 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC23.18■■□□□ 1.3
MBD4O95243 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC23.18■■□□□ 1.3
MBD4O95243 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
MBD4O95243 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC23.17■■□□□ 1.3
MBD4O95243 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC23.17■■□□□ 1.3
MBD4O95243 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
MBD4O95243 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
MBD4O95243 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
MBD4O95243 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
MBD4O95243 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
MBD4O95243 AC091390.4-202ENST00000476426 537 ntBASIC23.17■■□□□ 1.3
MBD4O95243 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC23.17■■□□□ 1.3
MBD4O95243 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC23.17■■□□□ 1.3
MBD4O95243 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC23.17■■□□□ 1.3
MBD4O95243 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC23.17■■□□□ 1.3
MBD4O95243 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
MBD4O95243 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
MBD4O95243 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
MBD4O95243 AC104417.2-201ENST00000562989 1793 ntBASIC23.17■■□□□ 1.3
MBD4O95243 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
MBD4O95243 ZNF815P-204ENST00000434898 1737 ntBASIC23.16■■□□□ 1.3
MBD4O95243 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC23.16■■□□□ 1.3
MBD4O95243 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC23.16■■□□□ 1.3
MBD4O95243 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC23.16■■□□□ 1.3
MBD4O95243 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC23.16■■□□□ 1.3
MBD4O95243 AC211429.1-201ENST00000415277 523 ntBASIC23.16■■□□□ 1.3
MBD4O95243 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.16■■□□□ 1.3
MBD4O95243 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC23.16■■□□□ 1.3
MBD4O95243 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC23.16■■□□□ 1.3
MBD4O95243 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC23.16■■□□□ 1.3
MBD4O95243 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
MBD4O95243 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
MBD4O95243 KRT8P41-201ENST00000533985 1514 ntBASIC23.16■■□□□ 1.3
MBD4O95243 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC23.16■■□□□ 1.3
MBD4O95243 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
MBD4O95243 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC23.16■■□□□ 1.3
MBD4O95243 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
MBD4O95243 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
MBD4O95243 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC23.15■■□□□ 1.3
MBD4O95243 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
MBD4O95243 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
MBD4O95243 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC23.15■■□□□ 1.3
MBD4O95243 MMP23A-201ENST00000234610 1017 ntBASIC23.15■■□□□ 1.3
MBD4O95243 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
MBD4O95243 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
MBD4O95243 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
MBD4O95243 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
MBD4O95243 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC23.15■■□□□ 1.3
MBD4O95243 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC23.15■■□□□ 1.3
MBD4O95243 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC23.15■■□□□ 1.3
MBD4O95243 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
MBD4O95243 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC23.15■■□□□ 1.3
MBD4O95243 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC23.15■■□□□ 1.3
MBD4O95243 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC23.15■■□□□ 1.3
MBD4O95243 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
MBD4O95243 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC23.14■■□□□ 1.3
MBD4O95243 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC23.14■■□□□ 1.3
MBD4O95243 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC23.14■■□□□ 1.3
MBD4O95243 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
MBD4O95243 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC23.14■■□□□ 1.3
MBD4O95243 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.14■■□□□ 1.3
MBD4O95243 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
MBD4O95243 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
MBD4O95243 AL158211.5-201ENST00000623583 2518 ntBASIC23.14■■□□□ 1.3
MBD4O95243 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
MBD4O95243 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
MBD4O95243 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
MBD4O95243 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC23.14■■□□□ 1.29
MBD4O95243 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC23.14■■□□□ 1.29
MBD4O95243 FITM1-202ENST00000559294 800 ntBASIC23.14■■□□□ 1.29
MBD4O95243 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC23.14■■□□□ 1.29
MBD4O95243 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC23.14■■□□□ 1.29
MBD4O95243 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC23.14■■□□□ 1.29
MBD4O95243 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC23.14■■□□□ 1.29
MBD4O95243 DGCR10-201ENST00000609839 495 ntBASIC23.14■■□□□ 1.29
MBD4O95243 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
MBD4O95243 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms