Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
PCF11O94913 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC30.3■■■□□ 2.44
PCF11O94913 MIR4674-201ENST00000582457 87 ntBASIC30.3■■■□□ 2.44
PCF11O94913 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC30.3■■■□□ 2.44
PCF11O94913 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PCF11O94913 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC30.3■■■□□ 2.44
PCF11O94913 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PCF11O94913 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
PCF11O94913 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
PCF11O94913 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
PCF11O94913 AC009947.2-201ENST00000444014 672 ntBASIC30.29■■■□□ 2.44
PCF11O94913 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC30.29■■■□□ 2.44
PCF11O94913 AL359075.1-203ENST00000462729 1002 ntBASIC30.29■■■□□ 2.44
PCF11O94913 GPX4-207ENST00000589115 812 ntTSL 2 BASIC30.29■■■□□ 2.44
PCF11O94913 AC008622.2-201ENST00000617006 1229 ntBASIC30.29■■■□□ 2.44
PCF11O94913 AL023973.1-201ENST00000624619 620 ntBASIC30.29■■■□□ 2.44
PCF11O94913 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC30.29■■■□□ 2.44
PCF11O94913 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC30.29■■■□□ 2.44
PCF11O94913 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
PCF11O94913 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
PCF11O94913 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
PCF11O94913 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
PCF11O94913 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC30.28■■■□□ 2.44
PCF11O94913 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
PCF11O94913 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC30.28■■■□□ 2.44
PCF11O94913 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC30.28■■■□□ 2.44
PCF11O94913 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
PCF11O94913 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
PCF11O94913 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC30.28■■■□□ 2.44
PCF11O94913 AC083849.1-201ENST00000615227 514 ntBASIC30.28■■■□□ 2.44
PCF11O94913 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
PCF11O94913 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC30.28■■■□□ 2.44
PCF11O94913 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
PCF11O94913 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
PCF11O94913 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC30.28■■■□□ 2.44
PCF11O94913 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC30.28■■■□□ 2.44
PCF11O94913 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC30.28■■■□□ 2.44
PCF11O94913 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC30.28■■■□□ 2.44
PCF11O94913 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
PCF11O94913 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
PCF11O94913 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
PCF11O94913 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
PCF11O94913 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC30.27■■■□□ 2.44
PCF11O94913 ANKRD18DP-204ENST00000455355 1975 ntBASIC30.27■■■□□ 2.44
PCF11O94913 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
PCF11O94913 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
PCF11O94913 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC30.27■■■□□ 2.44
PCF11O94913 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC30.27■■■□□ 2.44
PCF11O94913 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC30.27■■■□□ 2.44
PCF11O94913 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC30.27■■■□□ 2.44
PCF11O94913 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC30.27■■■□□ 2.44
PCF11O94913 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
PCF11O94913 AL157384.1-201ENST00000445995 2473 ntBASIC30.27■■■□□ 2.44
PCF11O94913 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC30.27■■■□□ 2.44
PCF11O94913 TBC1D3P2-202ENST00000577902 1649 ntBASIC30.27■■■□□ 2.44
PCF11O94913 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
PCF11O94913 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
PCF11O94913 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
PCF11O94913 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
PCF11O94913 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
PCF11O94913 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
PCF11O94913 TSPY23P-201ENST00000440136 739 ntBASIC30.26■■■□□ 2.43
PCF11O94913 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC30.26■■■□□ 2.43
PCF11O94913 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC30.26■■■□□ 2.43
PCF11O94913 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC30.26■■■□□ 2.43
PCF11O94913 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
PCF11O94913 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
PCF11O94913 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
PCF11O94913 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
PCF11O94913 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
PCF11O94913 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
PCF11O94913 ZNF815P-204ENST00000434898 1737 ntBASIC30.25■■■□□ 2.43
PCF11O94913 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC30.25■■■□□ 2.43
PCF11O94913 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC30.25■■■□□ 2.43
PCF11O94913 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
PCF11O94913 AL441883.1-201ENST00000566170 1045 ntBASIC30.25■■■□□ 2.43
PCF11O94913 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC30.25■■■□□ 2.43
PCF11O94913 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
PCF11O94913 KRT8P45-201ENST00000414328 1447 ntBASIC30.25■■■□□ 2.43
PCF11O94913 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
PCF11O94913 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
PCF11O94913 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
PCF11O94913 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
PCF11O94913 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC30.25■■■□□ 2.43
PCF11O94913 ILF2-202ENST00000368681 726 ntTSL 2 BASIC30.24■■■□□ 2.43
PCF11O94913 SAPCD2P2-201ENST00000431719 1174 ntBASIC30.24■■■□□ 2.43
PCF11O94913 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC30.24■■■□□ 2.43
PCF11O94913 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
PCF11O94913 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
PCF11O94913 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
PCF11O94913 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
PCF11O94913 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
PCF11O94913 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
PCF11O94913 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC30.24■■■□□ 2.43
PCF11O94913 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC30.24■■■□□ 2.43
PCF11O94913 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
PCF11O94913 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
PCF11O94913 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC30.24■■■□□ 2.43
PCF11O94913 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
PCF11O94913 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms