Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.33■□□□□ 0.69
NDUFS3O75489 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.33■□□□□ 0.69
NDUFS3O75489 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NDUFS3O75489 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.33■□□□□ 0.68
NDUFS3O75489 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
NDUFS3O75489 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.33■□□□□ 0.68
NDUFS3O75489 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.33■□□□□ 0.68
NDUFS3O75489 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.33■□□□□ 0.68
NDUFS3O75489 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.33■□□□□ 0.68
NDUFS3O75489 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.33■□□□□ 0.68
NDUFS3O75489 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NDUFS3O75489 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDUFS3O75489 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDUFS3O75489 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDUFS3O75489 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDUFS3O75489 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.32■□□□□ 0.68
NDUFS3O75489 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.32■□□□□ 0.68
NDUFS3O75489 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.32■□□□□ 0.68
NDUFS3O75489 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
NDUFS3O75489 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDUFS3O75489 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NDUFS3O75489 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDUFS3O75489 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.32■□□□□ 0.68
NDUFS3O75489 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.32■□□□□ 0.68
NDUFS3O75489 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.32■□□□□ 0.68
NDUFS3O75489 AC069544.1-201ENST00000609399 999 ntBASIC19.32■□□□□ 0.68
NDUFS3O75489 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
NDUFS3O75489 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDUFS3O75489 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.32■□□□□ 0.68
NDUFS3O75489 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NDUFS3O75489 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
NDUFS3O75489 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NDUFS3O75489 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
NDUFS3O75489 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDUFS3O75489 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.31■□□□□ 0.68
NDUFS3O75489 ZNF815P-204ENST00000434898 1737 ntBASIC19.31■□□□□ 0.68
NDUFS3O75489 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NDUFS3O75489 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDUFS3O75489 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDUFS3O75489 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDUFS3O75489 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NDUFS3O75489 NBPF21P-201ENST00000425093 1451 ntBASIC19.31■□□□□ 0.68
NDUFS3O75489 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDUFS3O75489 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NDUFS3O75489 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
NDUFS3O75489 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.31■□□□□ 0.68
NDUFS3O75489 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.31■□□□□ 0.68
NDUFS3O75489 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.31■□□□□ 0.68
NDUFS3O75489 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NDUFS3O75489 MTDHP1-201ENST00000605323 784 ntBASIC19.31■□□□□ 0.68
NDUFS3O75489 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.31■□□□□ 0.68
NDUFS3O75489 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
NDUFS3O75489 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.31■□□□□ 0.68
NDUFS3O75489 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NDUFS3O75489 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.3■□□□□ 0.68
NDUFS3O75489 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.3■□□□□ 0.68
NDUFS3O75489 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.3■□□□□ 0.68
NDUFS3O75489 HCG11-201ENST00000411553 5696 ntBASIC19.3■□□□□ 0.68
NDUFS3O75489 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDUFS3O75489 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDUFS3O75489 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDUFS3O75489 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NDUFS3O75489 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.3■□□□□ 0.68
NDUFS3O75489 CD99P1-205ENST00000527459 561 ntBASIC19.3■□□□□ 0.68
NDUFS3O75489 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
NDUFS3O75489 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDUFS3O75489 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDUFS3O75489 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDUFS3O75489 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDUFS3O75489 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDUFS3O75489 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NDUFS3O75489 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
NDUFS3O75489 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NDUFS3O75489 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NDUFS3O75489 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
NDUFS3O75489 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
NDUFS3O75489 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.29■□□□□ 0.68
NDUFS3O75489 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
NDUFS3O75489 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NDUFS3O75489 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.29■□□□□ 0.68
NDUFS3O75489 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.29■□□□□ 0.68
NDUFS3O75489 AC233263.1-201ENST00000578059 224 ntBASIC19.29■□□□□ 0.68
NDUFS3O75489 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.29■□□□□ 0.68
NDUFS3O75489 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.29■□□□□ 0.68
NDUFS3O75489 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NDUFS3O75489 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NDUFS3O75489 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NDUFS3O75489 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.29■□□□□ 0.68
NDUFS3O75489 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.29■□□□□ 0.68
NDUFS3O75489 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
NDUFS3O75489 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.28■□□□□ 0.68
NDUFS3O75489 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NDUFS3O75489 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NDUFS3O75489 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.28■□□□□ 0.68
NDUFS3O75489 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.28■□□□□ 0.68
NDUFS3O75489 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
NDUFS3O75489 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NDUFS3O75489 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.28■□□□□ 0.68
NDUFS3O75489 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NDUFS3O75489 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms