Protein–RNA interactions for Protein: O60393

NOBOX, Homeobox protein NOBOX, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOBOXO60393 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NOBOXO60393 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NOBOXO60393 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NOBOXO60393 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
NOBOXO60393 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NOBOXO60393 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.2■□□□□ 0.66
NOBOXO60393 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NOBOXO60393 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.19■□□□□ 0.66
NOBOXO60393 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NOBOXO60393 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NOBOXO60393 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NOBOXO60393 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NOBOXO60393 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.19■□□□□ 0.66
NOBOXO60393 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.19■□□□□ 0.66
NOBOXO60393 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.19■□□□□ 0.66
NOBOXO60393 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
NOBOXO60393 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.19■□□□□ 0.66
NOBOXO60393 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.19■□□□□ 0.66
NOBOXO60393 RBM17P1-201ENST00000453646 1190 ntBASIC19.19■□□□□ 0.66
NOBOXO60393 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.19■□□□□ 0.66
NOBOXO60393 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.19■□□□□ 0.66
NOBOXO60393 C1QL1P1-201ENST00000568105 661 ntBASIC19.19■□□□□ 0.66
NOBOXO60393 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NOBOXO60393 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NOBOXO60393 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NOBOXO60393 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NOBOXO60393 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.19■□□□□ 0.66
NOBOXO60393 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NOBOXO60393 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.19■□□□□ 0.66
NOBOXO60393 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
NOBOXO60393 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NOBOXO60393 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NOBOXO60393 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NOBOXO60393 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NOBOXO60393 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NOBOXO60393 MMP23A-201ENST00000234610 1017 ntBASIC19.18■□□□□ 0.66
NOBOXO60393 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NOBOXO60393 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NOBOXO60393 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.18■□□□□ 0.66
NOBOXO60393 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.18■□□□□ 0.66
NOBOXO60393 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.18■□□□□ 0.66
NOBOXO60393 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.18■□□□□ 0.66
NOBOXO60393 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.18■□□□□ 0.66
NOBOXO60393 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.18■□□□□ 0.66
NOBOXO60393 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NOBOXO60393 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NOBOXO60393 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NOBOXO60393 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NOBOXO60393 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NOBOXO60393 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NOBOXO60393 AL020996.1-203ENST00000536896 2307 ntBASIC19.18■□□□□ 0.66
NOBOXO60393 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NOBOXO60393 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
NOBOXO60393 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NOBOXO60393 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NOBOXO60393 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.17■□□□□ 0.66
NOBOXO60393 KRT16P1-201ENST00000399124 1418 ntBASIC19.17■□□□□ 0.66
NOBOXO60393 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.17■□□□□ 0.66
NOBOXO60393 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.17■□□□□ 0.66
NOBOXO60393 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NOBOXO60393 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NOBOXO60393 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NOBOXO60393 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NOBOXO60393 AC079598.2-202ENST00000546624 1451 ntBASIC19.17■□□□□ 0.66
NOBOXO60393 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NOBOXO60393 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NOBOXO60393 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NOBOXO60393 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
NOBOXO60393 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.17■□□□□ 0.66
NOBOXO60393 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NOBOXO60393 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.17■□□□□ 0.66
NOBOXO60393 YBX1P10-201ENST00000444752 975 ntBASIC19.17■□□□□ 0.66
NOBOXO60393 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.17■□□□□ 0.66
NOBOXO60393 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NOBOXO60393 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NOBOXO60393 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.17■□□□□ 0.66
NOBOXO60393 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.17■□□□□ 0.66
NOBOXO60393 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NOBOXO60393 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NOBOXO60393 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.17■□□□□ 0.66
NOBOXO60393 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NOBOXO60393 PHGDH-210ENST00000641115 1638 ntBASIC19.17■□□□□ 0.66
NOBOXO60393 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.17■□□□□ 0.66
NOBOXO60393 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
NOBOXO60393 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NOBOXO60393 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NOBOXO60393 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NOBOXO60393 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NOBOXO60393 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
NOBOXO60393 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NOBOXO60393 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
NOBOXO60393 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
NOBOXO60393 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NOBOXO60393 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NOBOXO60393 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.16■□□□□ 0.66
NOBOXO60393 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
NOBOXO60393 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NOBOXO60393 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NOBOXO60393 AC116562.2-201ENST00000507042 360 ntBASIC19.16■□□□□ 0.66
NOBOXO60393 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms