Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EIF3FO00303 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EIF3FO00303 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.97■□□□□ 0.63
EIF3FO00303 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.97■□□□□ 0.63
EIF3FO00303 AC128676.1-201ENST00000454392 318 ntBASIC18.97■□□□□ 0.63
EIF3FO00303 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EIF3FO00303 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
EIF3FO00303 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
EIF3FO00303 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
EIF3FO00303 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.97■□□□□ 0.63
EIF3FO00303 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.97■□□□□ 0.63
EIF3FO00303 AC110285.5-201ENST00000611501 352 ntBASIC18.97■□□□□ 0.63
EIF3FO00303 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
EIF3FO00303 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.97■□□□□ 0.63
EIF3FO00303 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.97■□□□□ 0.63
EIF3FO00303 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
EIF3FO00303 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
EIF3FO00303 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.97■□□□□ 0.63
EIF3FO00303 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.97■□□□□ 0.63
EIF3FO00303 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
EIF3FO00303 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.97■□□□□ 0.63
EIF3FO00303 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
EIF3FO00303 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.97■□□□□ 0.63
EIF3FO00303 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
EIF3FO00303 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
EIF3FO00303 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.96■□□□□ 0.63
EIF3FO00303 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EIF3FO00303 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
EIF3FO00303 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EIF3FO00303 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.96■□□□□ 0.63
EIF3FO00303 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.96■□□□□ 0.63
EIF3FO00303 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.96■□□□□ 0.63
EIF3FO00303 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EIF3FO00303 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EIF3FO00303 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
EIF3FO00303 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EIF3FO00303 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
EIF3FO00303 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.96■□□□□ 0.63
EIF3FO00303 MIR4651-201ENST00000582622 73 ntBASIC18.96■□□□□ 0.63
EIF3FO00303 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
EIF3FO00303 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
EIF3FO00303 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
EIF3FO00303 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
EIF3FO00303 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
EIF3FO00303 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.96■□□□□ 0.63
EIF3FO00303 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EIF3FO00303 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EIF3FO00303 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.96■□□□□ 0.63
EIF3FO00303 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
EIF3FO00303 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
EIF3FO00303 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EIF3FO00303 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EIF3FO00303 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EIF3FO00303 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
EIF3FO00303 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EIF3FO00303 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.95■□□□□ 0.62
EIF3FO00303 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EIF3FO00303 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.95■□□□□ 0.62
EIF3FO00303 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
EIF3FO00303 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.95■□□□□ 0.62
EIF3FO00303 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.95■□□□□ 0.62
EIF3FO00303 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
EIF3FO00303 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EIF3FO00303 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
EIF3FO00303 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
EIF3FO00303 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
EIF3FO00303 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
EIF3FO00303 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EIF3FO00303 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
EIF3FO00303 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
EIF3FO00303 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EIF3FO00303 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
EIF3FO00303 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EIF3FO00303 AC141586.3-201ENST00000562166 1838 ntBASIC18.95■□□□□ 0.62
EIF3FO00303 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EIF3FO00303 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EIF3FO00303 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
EIF3FO00303 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EIF3FO00303 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
EIF3FO00303 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
EIF3FO00303 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.94■□□□□ 0.62
EIF3FO00303 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
EIF3FO00303 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
EIF3FO00303 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EIF3FO00303 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.94■□□□□ 0.62
EIF3FO00303 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
EIF3FO00303 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
EIF3FO00303 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.94■□□□□ 0.62
EIF3FO00303 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.94■□□□□ 0.62
EIF3FO00303 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.94■□□□□ 0.62
EIF3FO00303 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.94■□□□□ 0.62
EIF3FO00303 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
EIF3FO00303 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
EIF3FO00303 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
EIF3FO00303 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
EIF3FO00303 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
EIF3FO00303 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.93■□□□□ 0.62
EIF3FO00303 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.93■□□□□ 0.62
EIF3FO00303 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.93■□□□□ 0.62
EIF3FO00303 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms