Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 TMPOP1-202ENST00000424642 1267 ntBASIC19.43■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.43■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.43■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.43■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.43■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.43■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.42■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.42■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.42■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.42■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.42■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 AL137013.1-201ENST00000432946 1228 ntBASIC19.42■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 SLC25A3P1-201ENST00000443844 931 ntBASIC19.42■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.42■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.42■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.42■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 AC092865.7-201ENST00000641832 219 ntBASIC19.42■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 LINC01521-201ENST00000504184 1943 ntBASIC19.42■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.42■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.42■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.41■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.41■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.41■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.41■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.41■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 AC005521.1-201ENST00000393351 872 ntBASIC19.41■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 CCR12P-201ENST00000446203 998 ntBASIC19.41■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.41■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 RN7SL850P-201ENST00000579959 291 ntBASIC19.41■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.41■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.41■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.4■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.4■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.4■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 LIN28AP1-201ENST00000429574 405 ntBASIC19.4■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.4■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.4■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 AC116562.4-202ENST00000641738 218 ntBASIC19.4■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.4■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.4■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.4■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.4■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
C1QTNF3-AMACRE9PGA6 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms