Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
YJEFN3A6XGL0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.25■□□□□ 0.83
YJEFN3A6XGL0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
YJEFN3A6XGL0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.25■□□□□ 0.83
YJEFN3A6XGL0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
YJEFN3A6XGL0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.25■□□□□ 0.83
YJEFN3A6XGL0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.25■□□□□ 0.83
YJEFN3A6XGL0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.25■□□□□ 0.83
YJEFN3A6XGL0 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
YJEFN3A6XGL0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
YJEFN3A6XGL0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
YJEFN3A6XGL0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.25■□□□□ 0.83
YJEFN3A6XGL0 MESTP1-201ENST00000404287 994 ntBASIC20.25■□□□□ 0.83
YJEFN3A6XGL0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.25■□□□□ 0.83
YJEFN3A6XGL0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
YJEFN3A6XGL0 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.25■□□□□ 0.83
YJEFN3A6XGL0 TSPY15P-201ENST00000457163 923 ntBASIC20.25■□□□□ 0.83
YJEFN3A6XGL0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.25■□□□□ 0.83
YJEFN3A6XGL0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.25■□□□□ 0.83
YJEFN3A6XGL0 AC026271.3-201ENST00000571884 352 ntBASIC20.25■□□□□ 0.83
YJEFN3A6XGL0 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.25■□□□□ 0.83
YJEFN3A6XGL0 REXO1L10P-201ENST00000615707 1290 ntBASIC20.25■□□□□ 0.83
YJEFN3A6XGL0 REXO1L12P-201ENST00000622156 912 ntBASIC20.25■□□□□ 0.83
YJEFN3A6XGL0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
YJEFN3A6XGL0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
YJEFN3A6XGL0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.25■□□□□ 0.83
YJEFN3A6XGL0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.25■□□□□ 0.83
YJEFN3A6XGL0 KRT17P2-201ENST00000300992 1314 ntBASIC20.25■□□□□ 0.83
YJEFN3A6XGL0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.24■□□□□ 0.83
YJEFN3A6XGL0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
YJEFN3A6XGL0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
YJEFN3A6XGL0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.24■□□□□ 0.83
YJEFN3A6XGL0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.24■□□□□ 0.83
YJEFN3A6XGL0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
YJEFN3A6XGL0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
YJEFN3A6XGL0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.24■□□□□ 0.83
YJEFN3A6XGL0 AC011506.1-201ENST00000474329 610 ntBASIC20.24■□□□□ 0.83
YJEFN3A6XGL0 AC116562.2-201ENST00000507042 360 ntBASIC20.24■□□□□ 0.83
YJEFN3A6XGL0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
YJEFN3A6XGL0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.24■□□□□ 0.83
YJEFN3A6XGL0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.24■□□□□ 0.83
YJEFN3A6XGL0 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
YJEFN3A6XGL0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
YJEFN3A6XGL0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
YJEFN3A6XGL0 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
YJEFN3A6XGL0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
YJEFN3A6XGL0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
YJEFN3A6XGL0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
YJEFN3A6XGL0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
YJEFN3A6XGL0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
YJEFN3A6XGL0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.23■□□□□ 0.83
YJEFN3A6XGL0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.23■□□□□ 0.83
YJEFN3A6XGL0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
YJEFN3A6XGL0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.23■□□□□ 0.83
YJEFN3A6XGL0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.23■□□□□ 0.83
YJEFN3A6XGL0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.23■□□□□ 0.83
YJEFN3A6XGL0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
YJEFN3A6XGL0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.23■□□□□ 0.83
YJEFN3A6XGL0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
YJEFN3A6XGL0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
YJEFN3A6XGL0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.23■□□□□ 0.83
YJEFN3A6XGL0 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
YJEFN3A6XGL0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.23■□□□□ 0.83
YJEFN3A6XGL0 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.23■□□□□ 0.83
YJEFN3A6XGL0 SDHAP1-207ENST00000440850 2000 ntBASIC20.23■□□□□ 0.83
YJEFN3A6XGL0 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
YJEFN3A6XGL0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.23■□□□□ 0.83
YJEFN3A6XGL0 AL355075.4-201ENST00000554988 638 ntBASIC20.23■□□□□ 0.83
YJEFN3A6XGL0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.23■□□□□ 0.83
YJEFN3A6XGL0 Z82202.1-201ENST00000623446 1880 ntBASIC20.23■□□□□ 0.83
YJEFN3A6XGL0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.23■□□□□ 0.83
YJEFN3A6XGL0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
YJEFN3A6XGL0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
YJEFN3A6XGL0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
YJEFN3A6XGL0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.23■□□□□ 0.83
YJEFN3A6XGL0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.23■□□□□ 0.83
YJEFN3A6XGL0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
YJEFN3A6XGL0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.23■□□□□ 0.83
YJEFN3A6XGL0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
YJEFN3A6XGL0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
YJEFN3A6XGL0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
YJEFN3A6XGL0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
YJEFN3A6XGL0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
YJEFN3A6XGL0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
YJEFN3A6XGL0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.22■□□□□ 0.83
YJEFN3A6XGL0 RCC2P6-201ENST00000526625 1557 ntBASIC20.22■□□□□ 0.83
YJEFN3A6XGL0 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
YJEFN3A6XGL0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
YJEFN3A6XGL0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
YJEFN3A6XGL0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
YJEFN3A6XGL0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.22■□□□□ 0.83
YJEFN3A6XGL0 B3GAT3P1-201ENST00000471720 806 ntBASIC20.22■□□□□ 0.83
YJEFN3A6XGL0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.22■□□□□ 0.83
YJEFN3A6XGL0 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.22■□□□□ 0.83
YJEFN3A6XGL0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.22■□□□□ 0.83
YJEFN3A6XGL0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.22■□□□□ 0.83
YJEFN3A6XGL0 MIR6786-201ENST00000616843 113 ntBASIC20.22■□□□□ 0.83
YJEFN3A6XGL0 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.22■□□□□ 0.83
YJEFN3A6XGL0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
YJEFN3A6XGL0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms