Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF103-CHMP3A0A140T963 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RNF103-CHMP3A0A140T963 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.66■□□□□ 0.58
RNF103-CHMP3A0A140T963 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RNF103-CHMP3A0A140T963 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF103-CHMP3A0A140T963 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF103-CHMP3A0A140T963 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF103-CHMP3A0A140T963 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF103-CHMP3A0A140T963 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF103-CHMP3A0A140T963 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.66■□□□□ 0.58
RNF103-CHMP3A0A140T963 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.66■□□□□ 0.58
RNF103-CHMP3A0A140T963 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF103-CHMP3A0A140T963 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF103-CHMP3A0A140T963 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.66■□□□□ 0.58
RNF103-CHMP3A0A140T963 AC080038.1-201ENST00000611274 1154 ntBASIC18.66■□□□□ 0.58
RNF103-CHMP3A0A140T963 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF103-CHMP3A0A140T963 AC092437.1-201ENST00000624794 1048 ntBASIC18.66■□□□□ 0.58
RNF103-CHMP3A0A140T963 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RNF103-CHMP3A0A140T963 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RNF103-CHMP3A0A140T963 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.66■□□□□ 0.58
RNF103-CHMP3A0A140T963 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF103-CHMP3A0A140T963 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RNF103-CHMP3A0A140T963 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF103-CHMP3A0A140T963 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF103-CHMP3A0A140T963 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RNF103-CHMP3A0A140T963 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF103-CHMP3A0A140T963 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF103-CHMP3A0A140T963 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF103-CHMP3A0A140T963 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF103-CHMP3A0A140T963 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF103-CHMP3A0A140T963 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF103-CHMP3A0A140T963 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF103-CHMP3A0A140T963 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RNF103-CHMP3A0A140T963 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF103-CHMP3A0A140T963 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF103-CHMP3A0A140T963 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.65■□□□□ 0.58
RNF103-CHMP3A0A140T963 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF103-CHMP3A0A140T963 IKBKGP1-201ENST00000612193 1073 ntBASIC18.65■□□□□ 0.58
RNF103-CHMP3A0A140T963 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF103-CHMP3A0A140T963 AC073111.5-205ENST00000641717 521 ntBASIC18.65■□□□□ 0.58
RNF103-CHMP3A0A140T963 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF103-CHMP3A0A140T963 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF103-CHMP3A0A140T963 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF103-CHMP3A0A140T963 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RNF103-CHMP3A0A140T963 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RNF103-CHMP3A0A140T963 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF103-CHMP3A0A140T963 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF103-CHMP3A0A140T963 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF103-CHMP3A0A140T963 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF103-CHMP3A0A140T963 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF103-CHMP3A0A140T963 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RNF103-CHMP3A0A140T963 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF103-CHMP3A0A140T963 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF103-CHMP3A0A140T963 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF103-CHMP3A0A140T963 LSM12P1-201ENST00000411836 588 ntBASIC18.64■□□□□ 0.57
RNF103-CHMP3A0A140T963 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF103-CHMP3A0A140T963 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF103-CHMP3A0A140T963 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF103-CHMP3A0A140T963 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF103-CHMP3A0A140T963 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF103-CHMP3A0A140T963 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF103-CHMP3A0A140T963 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF103-CHMP3A0A140T963 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF103-CHMP3A0A140T963 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF103-CHMP3A0A140T963 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF103-CHMP3A0A140T963 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF103-CHMP3A0A140T963 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF103-CHMP3A0A140T963 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF103-CHMP3A0A140T963 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF103-CHMP3A0A140T963 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF103-CHMP3A0A140T963 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF103-CHMP3A0A140T963 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF103-CHMP3A0A140T963 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RNF103-CHMP3A0A140T963 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.63■□□□□ 0.57
RNF103-CHMP3A0A140T963 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF103-CHMP3A0A140T963 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
RNF103-CHMP3A0A140T963 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF103-CHMP3A0A140T963 LINC01465-201ENST00000408887 1940 ntBASIC18.63■□□□□ 0.57
RNF103-CHMP3A0A140T963 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RNF103-CHMP3A0A140T963 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.63■□□□□ 0.57
RNF103-CHMP3A0A140T963 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF103-CHMP3A0A140T963 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF103-CHMP3A0A140T963 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF103-CHMP3A0A140T963 AC023632.3-201ENST00000521633 145 ntBASIC18.63■□□□□ 0.57
RNF103-CHMP3A0A140T963 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.63■□□□□ 0.57
RNF103-CHMP3A0A140T963 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.63■□□□□ 0.57
RNF103-CHMP3A0A140T963 AC133552.2-202ENST00000575694 574 ntBASIC18.63■□□□□ 0.57
RNF103-CHMP3A0A140T963 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF103-CHMP3A0A140T963 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF103-CHMP3A0A140T963 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF103-CHMP3A0A140T963 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF103-CHMP3A0A140T963 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF103-CHMP3A0A140T963 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF103-CHMP3A0A140T963 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF103-CHMP3A0A140T963 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RNF103-CHMP3A0A140T963 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RNF103-CHMP3A0A140T963 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF103-CHMP3A0A140T963 AP001271.2-201ENST00000624018 1556 ntBASIC18.63■□□□□ 0.57
RNF103-CHMP3A0A140T963 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF103-CHMP3A0A140T963 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms