Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.52□□□□□ -0.25
TRAV13-1A0A0B4J241 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC13.52□□□□□ -0.25
TRAV13-1A0A0B4J241 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
TRAV13-1A0A0B4J241 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV13-1A0A0B4J241 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV13-1A0A0B4J241 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV13-1A0A0B4J241 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TRAV13-1A0A0B4J241 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
TRAV13-1A0A0B4J241 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAV13-1A0A0B4J241 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV13-1A0A0B4J241 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV13-1A0A0B4J241 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAV13-1A0A0B4J241 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV13-1A0A0B4J241 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV13-1A0A0B4J241 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAV13-1A0A0B4J241 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
TRAV13-1A0A0B4J241 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV13-1A0A0B4J241 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV13-1A0A0B4J241 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV13-1A0A0B4J241 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TRAV13-1A0A0B4J241 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV13-1A0A0B4J241 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV13-1A0A0B4J241 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAV13-1A0A0B4J241 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV13-1A0A0B4J241 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TRAV13-1A0A0B4J241 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAV13-1A0A0B4J241 HLA-G-202ENST00000376815 851 ntBASIC13.51□□□□□ -0.25
TRAV13-1A0A0B4J241 HLA-G-203ENST00000376818 1127 ntBASIC13.51□□□□□ -0.25
TRAV13-1A0A0B4J241 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TRAV13-1A0A0B4J241 TFG-210ENST00000620299 1289 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAV13-1A0A0B4J241 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAV13-1A0A0B4J241 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV13-1A0A0B4J241 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV13-1A0A0B4J241 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
TRAV13-1A0A0B4J241 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
TRAV13-1A0A0B4J241 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV13-1A0A0B4J241 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 GAS2L1P2-201ENST00000436355 1356 ntBASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 AC016405.3-201ENST00000607710 860 ntBASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV13-1A0A0B4J241 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 MCRIP2P1-201ENST00000394346 511 ntBASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms