Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 AL008629.1-201ENST00000438615 184 ntBASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 PTMAP6-201ENST00000439110 327 ntBASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 MTND3P1-201ENST00000441336 220 ntBASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 AC108463.1-201ENST00000450258 347 ntBASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 SNRPCP3-201ENST00000474888 476 ntBASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 GAPDHP36-201ENST00000480688 918 ntBASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 RPS4XP20-201ENST00000505751 772 ntBASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 MTATP6P22-201ENST00000507369 598 ntBASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 AC009712.1-201ENST00000564938 316 ntBASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 MIR4504-201ENST00000577413 92 ntBASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 VN1R82P-201ENST00000601481 356 ntBASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 AC021171.1-201ENST00000603137 706 ntBASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 AC009597.2-201ENST00000604659 592 ntBASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 AL162431.4-201ENST00000604674 411 ntBASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 RPSAP73-201ENST00000614820 330 ntBASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 AP000484.1-201ENST00000620067 1252 ntBASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 AC011447.7-201ENST00000624228 1590 ntBASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 AP000776.1-201ENST00000530032 1663 ntBASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
COL4A3BPQ9Y5P4 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 RNA5SP507-201ENST00000363603 121 ntBASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 RNU6-157P-201ENST00000383957 107 ntBASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 ATP5F1P2-201ENST00000398143 760 ntBASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 LUZP4P1-201ENST00000415420 344 ntBASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 RPS3AP9-201ENST00000417027 792 ntBASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 AL138785.1-201ENST00000425821 331 ntBASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 AC005345.1-201ENST00000431868 217 ntBASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 IFNWP4-201ENST00000453148 294 ntBASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 VN1R40P-201ENST00000455196 941 ntBASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 AC087879.1-201ENST00000474343 374 ntBASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 ACTG1P13-201ENST00000486987 1043 ntBASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 SETP14-201ENST00000497538 873 ntBASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 AC016559.2-201ENST00000510759 359 ntBASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 OR5H4P-201ENST00000510851 923 ntBASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 AP003461.1-201ENST00000528866 78 ntBASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 ZNF321P-202ENST00000550843 495 ntBASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 AC124068.1-201ENST00000563131 678 ntBASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 MTCYBP28-201ENST00000566728 1132 ntBASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 MIR4443-201ENST00000585052 53 ntBASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 AC008751.2-201ENST00000597885 980 ntBASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 AC025811.1-201ENST00000604312 472 ntBASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 AP003485.2-201ENST00000623636 610 ntBASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 AC019226.2-201ENST00000625973 424 ntBASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 AC083843.2-201ENST00000568248 6253 ntBASIC5.87□□□□□ -1.47
COL4A3BPQ9Y5P4 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 AC011978.2-201ENST00000569835 2054 ntBASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 AC002525.1-201ENST00000624392 1622 ntBASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL4A3BPQ9Y5P4 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms