Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.68□□□□□ -1.66
YIPF1Q9Y548 MED6P1-201ENST00000439659 713 ntBASIC4.68□□□□□ -1.66
YIPF1Q9Y548 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.68□□□□□ -1.66
YIPF1Q9Y548 AC041039.1-201ENST00000485656 536 ntBASIC4.68□□□□□ -1.66
YIPF1Q9Y548 HMGB1P38-201ENST00000490557 577 ntBASIC4.68□□□□□ -1.66
YIPF1Q9Y548 TPT1P3-201ENST00000492841 512 ntBASIC4.68□□□□□ -1.66
YIPF1Q9Y548 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.68□□□□□ -1.66
YIPF1Q9Y548 AC110760.3-202ENST00000515177 371 ntBASIC4.68□□□□□ -1.66
YIPF1Q9Y548 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.68□□□□□ -1.66
YIPF1Q9Y548 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.68□□□□□ -1.66
YIPF1Q9Y548 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.68□□□□□ -1.66
YIPF1Q9Y548 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.68□□□□□ -1.66
YIPF1Q9Y548 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.68□□□□□ -1.66
YIPF1Q9Y548 LSM3P2-201ENST00000551246 273 ntBASIC4.68□□□□□ -1.66
YIPF1Q9Y548 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.68□□□□□ -1.66
YIPF1Q9Y548 AC090515.3-201ENST00000560431 315 ntBASIC4.68□□□□□ -1.66
YIPF1Q9Y548 AL109741.3-201ENST00000561748 592 ntBASIC4.68□□□□□ -1.66
YIPF1Q9Y548 MIR3160-1-201ENST00000577972 85 ntBASIC4.68□□□□□ -1.66
YIPF1Q9Y548 AP000919.1-202ENST00000581139 1264 ntBASIC4.68□□□□□ -1.66
YIPF1Q9Y548 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.68□□□□□ -1.66
YIPF1Q9Y548 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.68□□□□□ -1.66
YIPF1Q9Y548 AC018618.2-201ENST00000604770 446 ntBASIC4.68□□□□□ -1.66
YIPF1Q9Y548 AC010857.1-201ENST00000606398 594 ntBASIC4.68□□□□□ -1.66
YIPF1Q9Y548 AC034229.4-201ENST00000607861 441 ntBASIC4.68□□□□□ -1.66
YIPF1Q9Y548 AC090912.3-201ENST00000609775 533 ntBASIC4.68□□□□□ -1.66
YIPF1Q9Y548 AC023043.4-201ENST00000612081 449 ntBASIC4.68□□□□□ -1.66
YIPF1Q9Y548 AL050303.3-201ENST00000613704 284 ntBASIC4.68□□□□□ -1.66
YIPF1Q9Y548 AC084824.4-201ENST00000620106 731 ntBASIC4.68□□□□□ -1.66
YIPF1Q9Y548 MIR3653-201ENST00000625572 110 ntBASIC4.68□□□□□ -1.66
YIPF1Q9Y548 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
YIPF1Q9Y548 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.68□□□□□ -1.66
YIPF1Q9Y548 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.68□□□□□ -1.66
YIPF1Q9Y548 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
YIPF1Q9Y548 OR51H2P-202ENST00000641424 3046 ntBASIC4.67□□□□□ -1.66
YIPF1Q9Y548 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.67□□□□□ -1.66
YIPF1Q9Y548 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
YIPF1Q9Y548 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
YIPF1Q9Y548 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
YIPF1Q9Y548 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
YIPF1Q9Y548 AC091046.3-201ENST00000631455 1574 ntBASIC4.67□□□□□ -1.66
YIPF1Q9Y548 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
YIPF1Q9Y548 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.67□□□□□ -1.66
YIPF1Q9Y548 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.67□□□□□ -1.66
YIPF1Q9Y548 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
YIPF1Q9Y548 MIR331-201ENST00000362302 94 ntBASIC4.67□□□□□ -1.66
YIPF1Q9Y548 RNU1-83P-201ENST00000363426 164 ntBASIC4.67□□□□□ -1.66
YIPF1Q9Y548 RNA5SP366-201ENST00000365454 123 ntBASIC4.67□□□□□ -1.66
YIPF1Q9Y548 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
YIPF1Q9Y548 MTATP6P31-201ENST00000406985 692 ntBASIC4.67□□□□□ -1.66
YIPF1Q9Y548 SNORA11-201ENST00000408789 128 ntBASIC4.67□□□□□ -1.66
YIPF1Q9Y548 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.67□□□□□ -1.66
YIPF1Q9Y548 LINC01347-201ENST00000417964 355 ntBASIC4.67□□□□□ -1.66
YIPF1Q9Y548 OR51A6P-201ENST00000418680 1004 ntBASIC4.67□□□□□ -1.66
YIPF1Q9Y548 AC241520.1-201ENST00000422654 1099 ntBASIC4.67□□□□□ -1.66
YIPF1Q9Y548 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.67□□□□□ -1.66
YIPF1Q9Y548 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
YIPF1Q9Y548 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.67□□□□□ -1.66
YIPF1Q9Y548 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.67□□□□□ -1.66
YIPF1Q9Y548 RPL34P26-201ENST00000445636 354 ntBASIC4.67□□□□□ -1.66
YIPF1Q9Y548 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.67□□□□□ -1.66
YIPF1Q9Y548 GTF2IP9-201ENST00000502460 301 ntBASIC4.67□□□□□ -1.66
YIPF1Q9Y548 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.67□□□□□ -1.66
YIPF1Q9Y548 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.67□□□□□ -1.66
YIPF1Q9Y548 MTCO1P35-201ENST00000515270 228 ntBASIC4.67□□□□□ -1.66
YIPF1Q9Y548 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
YIPF1Q9Y548 RNA5SP497-201ENST00000516081 97 ntBASIC4.67□□□□□ -1.66
YIPF1Q9Y548 RNA5SP303-201ENST00000516192 130 ntBASIC4.67□□□□□ -1.66
YIPF1Q9Y548 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.67□□□□□ -1.66
YIPF1Q9Y548 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.67□□□□□ -1.66
YIPF1Q9Y548 TRAV8-5-201ENST00000537369 341 ntBASIC4.67□□□□□ -1.66
YIPF1Q9Y548 AC068993.1-201ENST00000546724 589 ntBASIC4.67□□□□□ -1.66
YIPF1Q9Y548 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.67□□□□□ -1.66
YIPF1Q9Y548 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.67□□□□□ -1.66
YIPF1Q9Y548 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.67□□□□□ -1.66
YIPF1Q9Y548 AL121890.2-201ENST00000617644 465 ntBASIC4.67□□□□□ -1.66
YIPF1Q9Y548 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.67□□□□□ -1.66
YIPF1Q9Y548 uc_338.13-201ENST00000618243 179 ntBASIC4.67□□□□□ -1.66
YIPF1Q9Y548 AC145207.9-201ENST00000623802 325 ntBASIC4.67□□□□□ -1.66
YIPF1Q9Y548 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.67□□□□□ -1.66
YIPF1Q9Y548 AC140479.6-201ENST00000633535 357 ntBASIC4.67□□□□□ -1.66
YIPF1Q9Y548 AC132825.7-201ENST00000638744 335 ntBASIC4.67□□□□□ -1.66
YIPF1Q9Y548 AC006927.2-201ENST00000639256 389 ntBASIC4.67□□□□□ -1.66
YIPF1Q9Y548 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.67□□□□□ -1.66
YIPF1Q9Y548 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.67□□□□□ -1.66
YIPF1Q9Y548 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
YIPF1Q9Y548 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
YIPF1Q9Y548 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
YIPF1Q9Y548 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.66□□□□□ -1.66
YIPF1Q9Y548 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
YIPF1Q9Y548 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
YIPF1Q9Y548 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
YIPF1Q9Y548 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
YIPF1Q9Y548 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
YIPF1Q9Y548 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
YIPF1Q9Y548 OR56B2P-201ENST00000317102 954 ntBASIC4.66□□□□□ -1.66
YIPF1Q9Y548 Y_RNA.126-201ENST00000363382 111 ntBASIC4.66□□□□□ -1.66
YIPF1Q9Y548 RNA5SP515-201ENST00000364570 118 ntBASIC4.66□□□□□ -1.66
YIPF1Q9Y548 RNU4-31P-201ENST00000384211 141 ntBASIC4.66□□□□□ -1.66
YIPF1Q9Y548 RNU6-452P-201ENST00000384406 107 ntBASIC4.66□□□□□ -1.66
YIPF1Q9Y548 RNA5SP296-201ENST00000410523 111 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms