Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
PKP3Q9Y446 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.88□□□□□ -1.63
PKP3Q9Y446 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.88□□□□□ -1.63
PKP3Q9Y446 RNU6-413P-201ENST00000384115 107 ntBASIC4.88□□□□□ -1.63
PKP3Q9Y446 ATP5F1P2-201ENST00000398143 760 ntBASIC4.88□□□□□ -1.63
PKP3Q9Y446 RNU6-77P-201ENST00000410554 91 ntBASIC4.88□□□□□ -1.63
PKP3Q9Y446 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.88□□□□□ -1.63
PKP3Q9Y446 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.88□□□□□ -1.63
PKP3Q9Y446 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.88□□□□□ -1.63
PKP3Q9Y446 MOB1AP1-201ENST00000430903 535 ntBASIC4.88□□□□□ -1.63
PKP3Q9Y446 RPS24P8-201ENST00000431490 402 ntBASIC4.88□□□□□ -1.63
PKP3Q9Y446 RPS6P15-201ENST00000431996 751 ntBASIC4.88□□□□□ -1.63
PKP3Q9Y446 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.88□□□□□ -1.63
PKP3Q9Y446 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.88□□□□□ -1.63
PKP3Q9Y446 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.88□□□□□ -1.63
PKP3Q9Y446 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.88□□□□□ -1.63
PKP3Q9Y446 AC000111.2-201ENST00000448200 210 ntBASIC4.88□□□□□ -1.63
PKP3Q9Y446 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.88□□□□□ -1.63
PKP3Q9Y446 RPL23AP12-201ENST00000467573 473 ntBASIC4.88□□□□□ -1.63
PKP3Q9Y446 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.88□□□□□ -1.63
PKP3Q9Y446 AC073522.1-201ENST00000483312 377 ntBASIC4.88□□□□□ -1.63
PKP3Q9Y446 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.88□□□□□ -1.63
PKP3Q9Y446 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.88□□□□□ -1.63
PKP3Q9Y446 AC034244.1-201ENST00000507687 207 ntBASIC4.88□□□□□ -1.63
PKP3Q9Y446 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.88□□□□□ -1.63
PKP3Q9Y446 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.88□□□□□ -1.63
PKP3Q9Y446 HMGB1P23-201ENST00000518743 568 ntBASIC4.88□□□□□ -1.63
PKP3Q9Y446 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.88□□□□□ -1.63
PKP3Q9Y446 AC010306.1-201ENST00000523223 1117 ntBASIC4.88□□□□□ -1.63
PKP3Q9Y446 AP000676.2-201ENST00000529711 301 ntBASIC4.88□□□□□ -1.63
PKP3Q9Y446 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.88□□□□□ -1.63
PKP3Q9Y446 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.88□□□□□ -1.63
PKP3Q9Y446 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PKP3Q9Y446 BNIP3P1-201ENST00000547295 580 ntBASIC4.88□□□□□ -1.63
PKP3Q9Y446 AC044913.1-201ENST00000557200 430 ntBASIC4.88□□□□□ -1.63
PKP3Q9Y446 NIFKP8-201ENST00000560500 874 ntBASIC4.88□□□□□ -1.63
PKP3Q9Y446 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.88□□□□□ -1.63
PKP3Q9Y446 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.88□□□□□ -1.63
PKP3Q9Y446 AC005412.1-201ENST00000580812 1049 ntBASIC4.88□□□□□ -1.63
PKP3Q9Y446 AP001269.3-201ENST00000588718 329 ntBASIC4.88□□□□□ -1.63
PKP3Q9Y446 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.88□□□□□ -1.63
PKP3Q9Y446 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.88□□□□□ -1.63
PKP3Q9Y446 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.88□□□□□ -1.63
PKP3Q9Y446 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.88□□□□□ -1.63
PKP3Q9Y446 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.88□□□□□ -1.63
PKP3Q9Y446 CR381572.2-201ENST00000624852 397 ntBASIC4.88□□□□□ -1.63
PKP3Q9Y446 AC092608.3-201ENST00000625017 386 ntBASIC4.88□□□□□ -1.63
PKP3Q9Y446 CASC19-222ENST00000641321 1173 ntBASIC4.88□□□□□ -1.63
PKP3Q9Y446 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PKP3Q9Y446 DDX18P5-201ENST00000534547 1306 ntBASIC4.88□□□□□ -1.63
PKP3Q9Y446 STX3-208ENST00000641815 3236 ntBASIC4.88□□□□□ -1.63
PKP3Q9Y446 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
PKP3Q9Y446 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.88□□□□□ -1.63
PKP3Q9Y446 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.88□□□□□ -1.63
PKP3Q9Y446 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PKP3Q9Y446 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
PKP3Q9Y446 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PKP3Q9Y446 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PKP3Q9Y446 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PKP3Q9Y446 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
PKP3Q9Y446 AC093591.2-201ENST00000565254 3843 ntBASIC4.87□□□□□ -1.63
PKP3Q9Y446 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.87□□□□□ -1.63
PKP3Q9Y446 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PKP3Q9Y446 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
PKP3Q9Y446 RN7SKP104-201ENST00000362605 328 ntBASIC4.87□□□□□ -1.63
PKP3Q9Y446 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PKP3Q9Y446 OR52E6-202ENST00000379946 954 ntBASIC4.87□□□□□ -1.63
PKP3Q9Y446 RNU6-317P-201ENST00000384031 107 ntBASIC4.87□□□□□ -1.63
PKP3Q9Y446 AL049545.1-201ENST00000401856 572 ntBASIC4.87□□□□□ -1.63
PKP3Q9Y446 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.87□□□□□ -1.63
PKP3Q9Y446 RNA5SP345-201ENST00000410646 108 ntBASIC4.87□□□□□ -1.63
PKP3Q9Y446 AC114814.2-201ENST00000419195 485 ntBASIC4.87□□□□□ -1.63
PKP3Q9Y446 AC048351.1-201ENST00000420064 602 ntBASIC4.87□□□□□ -1.63
PKP3Q9Y446 MTCO3P21-201ENST00000430791 643 ntBASIC4.87□□□□□ -1.63
PKP3Q9Y446 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.87□□□□□ -1.63
PKP3Q9Y446 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.87□□□□□ -1.63
PKP3Q9Y446 RPL34P6-201ENST00000432390 345 ntBASIC4.87□□□□□ -1.63
PKP3Q9Y446 AC093414.1-201ENST00000434712 514 ntBASIC4.87□□□□□ -1.63
PKP3Q9Y446 BTF3P6-201ENST00000448054 499 ntBASIC4.87□□□□□ -1.63
PKP3Q9Y446 NPM1P39-201ENST00000449818 867 ntBASIC4.87□□□□□ -1.63
PKP3Q9Y446 AC022431.1-201ENST00000450941 438 ntBASIC4.87□□□□□ -1.63
PKP3Q9Y446 AC234781.3-201ENST00000452540 973 ntBASIC4.87□□□□□ -1.63
PKP3Q9Y446 MRPL35P4-201ENST00000453682 566 ntBASIC4.87□□□□□ -1.63
PKP3Q9Y446 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.87□□□□□ -1.63
PKP3Q9Y446 USP9YP25-201ENST00000457708 443 ntBASIC4.87□□□□□ -1.63
PKP3Q9Y446 RPL23AP56-201ENST00000460778 453 ntBASIC4.87□□□□□ -1.63
PKP3Q9Y446 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PKP3Q9Y446 AC091951.3-201ENST00000504093 246 ntBASIC4.87□□□□□ -1.63
PKP3Q9Y446 GAPDHP56-201ENST00000506031 988 ntBASIC4.87□□□□□ -1.63
PKP3Q9Y446 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.87□□□□□ -1.63
PKP3Q9Y446 IGJP1-201ENST00000522682 475 ntBASIC4.87□□□□□ -1.63
PKP3Q9Y446 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.87□□□□□ -1.63
PKP3Q9Y446 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.87□□□□□ -1.63
PKP3Q9Y446 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.87□□□□□ -1.63
PKP3Q9Y446 AC008033.2-201ENST00000542626 177 ntBASIC4.87□□□□□ -1.63
PKP3Q9Y446 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.87□□□□□ -1.63
PKP3Q9Y446 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.87□□□□□ -1.63
PKP3Q9Y446 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.87□□□□□ -1.63
PKP3Q9Y446 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.87□□□□□ -1.63
PKP3Q9Y446 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms