Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 RHOT1P3-201ENST00000436571 331 ntBASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 ATG12P2-201ENST00000456830 416 ntBASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 AC091951.3-201ENST00000504093 246 ntBASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 RNU6-1004P-201ENST00000516584 111 ntBASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 RNU5A-4P-201ENST00000516588 111 ntBASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 OR4A2P-201ENST00000527276 913 ntBASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 AP000926.4-201ENST00000527351 454 ntBASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 GCSHP4-201ENST00000538792 439 ntBASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 AC027104.1-201ENST00000563702 681 ntBASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 CYP2C60P-201ENST00000566088 139 ntBASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 ATP5F1P7-201ENST00000567330 760 ntBASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 AC091042.1-201ENST00000579213 173 ntBASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 MIR3667-201ENST00000581025 74 ntBASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 AL109653.1-201ENST00000603091 248 ntBASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 AL353778.1-201ENST00000603149 408 ntBASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 MTND3P19-201ENST00000603825 345 ntBASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 AC021749.1-201ENST00000604322 607 ntBASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 AC024257.5-201ENST00000612739 531 ntBASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 MIR1322-201ENST00000638013 71 ntBASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SSX2IPQ9Y2D8 AC000123.3-201ENST00000624029 4975 ntBASIC5.4□□□□□ -1.55
SSX2IPQ9Y2D8 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SSX2IPQ9Y2D8 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SSX2IPQ9Y2D8 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SSX2IPQ9Y2D8 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
SSX2IPQ9Y2D8 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
SSX2IPQ9Y2D8 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SSX2IPQ9Y2D8 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 SEC63P2-201ENST00000503863 1939 ntBASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 RNU1-87P-201ENST00000363727 170 ntBASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 AC016397.1-201ENST00000412463 242 ntBASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 VTA1P1-201ENST00000414044 866 ntBASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 AC090960.1-201ENST00000421072 306 ntBASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 RPL7AP49-201ENST00000429522 581 ntBASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 AC009238.2-201ENST00000431026 355 ntBASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 AL591438.1-201ENST00000433508 581 ntBASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 AL008629.1-201ENST00000438615 184 ntBASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 AC002542.1-201ENST00000440683 193 ntBASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 NOP56P2-201ENST00000447491 769 ntBASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 ART2BP-201ENST00000453501 499 ntBASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 AL513533.1-201ENST00000453728 415 ntBASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 USP9YP25-201ENST00000457708 443 ntBASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 PSMC1P13-201ENST00000458195 985 ntBASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 RNA5SP103-201ENST00000459503 118 ntBASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 AC021205.1-201ENST00000468797 348 ntBASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 RPS3AP22-201ENST00000488297 769 ntBASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 AC092709.1-201ENST00000521355 1045 ntBASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 AL356057.1-201ENST00000533798 831 ntBASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 GSTP1P1-201ENST00000548078 319 ntBASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 AC010620.1-201ENST00000601088 1102 ntBASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 AC015726.1-201ENST00000602353 681 ntBASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 DPRXP5-201ENST00000604662 539 ntBASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 AC068620.4-201ENST00000636730 1182 ntBASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 AC111188.2-201ENST00000529697 1387 ntBASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms