Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 MIR200C-201ENST00000384980 68 ntBASIC4.99□□□□□ -1.61
SCN11AQ9UI33 MIR1251-201ENST00000408552 70 ntBASIC4.99□□□□□ -1.61
SCN11AQ9UI33 AC092647.1-201ENST00000420654 287 ntBASIC4.99□□□□□ -1.61
SCN11AQ9UI33 NPM1P34-201ENST00000428821 893 ntBASIC4.99□□□□□ -1.61
SCN11AQ9UI33 AC011742.1-201ENST00000431448 434 ntBASIC4.99□□□□□ -1.61
SCN11AQ9UI33 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.99□□□□□ -1.61
SCN11AQ9UI33 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.99□□□□□ -1.61
SCN11AQ9UI33 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.99□□□□□ -1.61
SCN11AQ9UI33 AL133162.1-201ENST00000463228 453 ntBASIC4.99□□□□□ -1.61
SCN11AQ9UI33 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.99□□□□□ -1.61
SCN11AQ9UI33 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.99□□□□□ -1.61
SCN11AQ9UI33 RN7SKP18-201ENST00000516005 275 ntBASIC4.99□□□□□ -1.61
SCN11AQ9UI33 AC084759.1-201ENST00000561168 290 ntBASIC4.99□□□□□ -1.61
SCN11AQ9UI33 U3.45-201ENST00000607547 219 ntBASIC4.99□□□□□ -1.61
SCN11AQ9UI33 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.99□□□□□ -1.61
SCN11AQ9UI33 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SCN11AQ9UI33 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
SCN11AQ9UI33 AC007529.1-201ENST00000418574 2178 ntBASIC4.99□□□□□ -1.61
SCN11AQ9UI33 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
SCN11AQ9UI33 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SCN11AQ9UI33 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SCN11AQ9UI33 ATP5F1P4-201ENST00000397288 746 ntBASIC4.99□□□□□ -1.61
SCN11AQ9UI33 SNORA3C-201ENST00000408792 125 ntBASIC4.99□□□□□ -1.61
SCN11AQ9UI33 HSPE1P16-201ENST00000426640 348 ntBASIC4.99□□□□□ -1.61
SCN11AQ9UI33 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.99□□□□□ -1.61
SCN11AQ9UI33 AL451050.1-201ENST00000450126 415 ntBASIC4.99□□□□□ -1.61
SCN11AQ9UI33 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.99□□□□□ -1.61
SCN11AQ9UI33 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SCN11AQ9UI33 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.99□□□□□ -1.61
SCN11AQ9UI33 U6.105-201ENST00000637379 88 ntBASIC4.99□□□□□ -1.61
SCN11AQ9UI33 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.99□□□□□ -1.61
SCN11AQ9UI33 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SCN11AQ9UI33 A2MP1-204ENST00000566278 4130 ntBASIC4.98□□□□□ -1.61
SCN11AQ9UI33 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SCN11AQ9UI33 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SCN11AQ9UI33 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SCN11AQ9UI33 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.98□□□□□ -1.61
SCN11AQ9UI33 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SCN11AQ9UI33 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SCN11AQ9UI33 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
SCN11AQ9UI33 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.98□□□□□ -1.61
SCN11AQ9UI33 SNORA3.3-201ENST00000408712 125 ntBASIC4.98□□□□□ -1.61
SCN11AQ9UI33 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.98□□□□□ -1.61
SCN11AQ9UI33 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.98□□□□□ -1.61
SCN11AQ9UI33 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SCN11AQ9UI33 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.98□□□□□ -1.61
SCN11AQ9UI33 RPS26P28-201ENST00000470806 348 ntBASIC4.98□□□□□ -1.61
SCN11AQ9UI33 RNA5SP164-201ENST00000516533 110 ntBASIC4.98□□□□□ -1.61
SCN11AQ9UI33 ZNF415P1-201ENST00000582279 1166 ntBASIC4.98□□□□□ -1.61
SCN11AQ9UI33 AC006363.1-201ENST00000603806 463 ntBASIC4.98□□□□□ -1.61
SCN11AQ9UI33 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.98□□□□□ -1.61
SCN11AQ9UI33 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SCN11AQ9UI33 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
SCN11AQ9UI33 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCN11AQ9UI33 TCP1P3-201ENST00000414406 1498 ntBASIC4.97□□□□□ -1.61
SCN11AQ9UI33 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCN11AQ9UI33 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCN11AQ9UI33 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCN11AQ9UI33 SNORD3H-201ENST00000384486 214 ntBASIC4.97□□□□□ -1.61
SCN11AQ9UI33 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.97□□□□□ -1.61
SCN11AQ9UI33 NPM1P25-201ENST00000429734 854 ntBASIC4.97□□□□□ -1.61
SCN11AQ9UI33 AC106707.2-201ENST00000484182 374 ntBASIC4.97□□□□□ -1.61
SCN11AQ9UI33 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.97□□□□□ -1.61
SCN11AQ9UI33 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SCN11AQ9UI33 AC020914.6-201ENST00000594327 272 ntBASIC4.97□□□□□ -1.61
SCN11AQ9UI33 AL391261.4-201ENST00000616012 481 ntBASIC4.97□□□□□ -1.61
SCN11AQ9UI33 AC016957.2-201ENST00000616998 848 ntBASIC4.97□□□□□ -1.61
SCN11AQ9UI33 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCN11AQ9UI33 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.97□□□□□ -1.61
SCN11AQ9UI33 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SCN11AQ9UI33 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SCN11AQ9UI33 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCN11AQ9UI33 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCN11AQ9UI33 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SCN11AQ9UI33 MAPK10-303ENST00000641324 3959 ntBASIC4.97□□□□□ -1.61
SCN11AQ9UI33 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SCN11AQ9UI33 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.96□□□□□ -1.61
SCN11AQ9UI33 RN7SKP97-201ENST00000410966 333 ntBASIC4.96□□□□□ -1.61
SCN11AQ9UI33 AL591419.1-201ENST00000427423 339 ntBASIC4.96□□□□□ -1.61
SCN11AQ9UI33 RPL7P4-203ENST00000430239 730 ntBASIC4.96□□□□□ -1.61
SCN11AQ9UI33 AC090589.1-201ENST00000473109 362 ntBASIC4.96□□□□□ -1.61
SCN11AQ9UI33 CDH12P2-201ENST00000504393 298 ntBASIC4.96□□□□□ -1.61
SCN11AQ9UI33 PPBPP1-201ENST00000510807 373 ntBASIC4.96□□□□□ -1.61
SCN11AQ9UI33 SNORA70.24-201ENST00000517233 118 ntBASIC4.96□□□□□ -1.61
SCN11AQ9UI33 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.96□□□□□ -1.61
SCN11AQ9UI33 MTND6P33-201ENST00000571794 183 ntBASIC4.96□□□□□ -1.61
SCN11AQ9UI33 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.96□□□□□ -1.61
SCN11AQ9UI33 MIR3651-201ENST00000630427 90 ntBASIC4.96□□□□□ -1.61
SCN11AQ9UI33 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SCN11AQ9UI33 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
SCN11AQ9UI33 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SCN11AQ9UI33 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.96□□□□□ -1.62
SCN11AQ9UI33 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
SCN11AQ9UI33 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SCN11AQ9UI33 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
SCN11AQ9UI33 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SCN11AQ9UI33 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SCN11AQ9UI33 AC073346.2-201ENST00000624724 2058 ntBASIC4.96□□□□□ -1.62
SCN11AQ9UI33 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SCN11AQ9UI33 AC096664.2-201ENST00000411843 406 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms