Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AL049737.1-201ENST00000413920 1403 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AC023421.1-201ENST00000590535 1785 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AC006210.2-201ENST00000367074 1545 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 RNU1-106P-201ENST00000384382 164 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AL138880.1-201ENST00000405824 642 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AP000357.1-201ENST00000409926 1165 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AC211486.3-201ENST00000412694 621 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AL590806.1-201ENST00000415818 853 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AC027644.1-201ENST00000419595 298 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 PTP4A1P5-201ENST00000420305 455 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AL358176.3-201ENST00000420757 454 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 RPS26P47-201ENST00000427219 348 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AC092393.1-201ENST00000439625 742 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 NOP56P2-201ENST00000447491 769 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 MTCO3P16-201ENST00000454456 754 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 NECAP1P2-201ENST00000455668 727 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 RNU7-140P-201ENST00000459546 60 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AC108734.3-201ENST00000481241 1165 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 RPSAP50-201ENST00000481955 852 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 CDH12P2-201ENST00000504393 298 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AC111000.2-201ENST00000507775 550 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 RN7SKP66-201ENST00000516681 231 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 HMGB3P26-201ENST00000560051 582 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AC027104.1-201ENST00000563702 681 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AC114947.2-201ENST00000565748 2125 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 CYP2C60P-201ENST00000566088 139 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 ATP5F1P7-201ENST00000567330 760 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 RN7SL708P-201ENST00000580952 299 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AC233280.2-201ENST00000603917 1070 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AC139769.3-201ENST00000618383 175 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 VN1R7P-201ENST00000619242 903 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 MIR6810-201ENST00000622701 70 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AC011815.3-201ENST00000624194 473 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 BMS1P21-201ENST00000634565 365 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 AL138820.1-201ENST00000617901 5305 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.25□□□□□ -1.57
DKK3Q9UBP4 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.25□□□□□ -1.57
DKK3Q9UBP4 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
DKK3Q9UBP4 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
DKK3Q9UBP4 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
DKK3Q9UBP4 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
DKK3Q9UBP4 AP000756.2-201ENST00000624168 2567 ntBASIC5.24□□□□□ -1.57
DKK3Q9UBP4 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.24□□□□□ -1.57
DKK3Q9UBP4 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.24□□□□□ -1.57
DKK3Q9UBP4 UGT2B26P-201ENST00000508672 1613 ntBASIC5.24□□□□□ -1.57
DKK3Q9UBP4 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
DKK3Q9UBP4 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.24□□□□□ -1.57
DKK3Q9UBP4 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
DKK3Q9UBP4 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
DKK3Q9UBP4 AC011155.1-201ENST00000316512 456 ntBASIC5.24□□□□□ -1.57
DKK3Q9UBP4 RNA5SP305-201ENST00000362665 119 ntBASIC5.24□□□□□ -1.57
DKK3Q9UBP4 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
DKK3Q9UBP4 MIR589-201ENST00000385238 99 ntBASIC5.24□□□□□ -1.57
DKK3Q9UBP4 RSL24D1P4-201ENST00000400938 484 ntBASIC5.24□□□□□ -1.57
DKK3Q9UBP4 GSTA8P-201ENST00000404253 637 ntBASIC5.24□□□□□ -1.57
DKK3Q9UBP4 SNORA11-201ENST00000408789 128 ntBASIC5.24□□□□□ -1.57
DKK3Q9UBP4 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC5.24□□□□□ -1.57
DKK3Q9UBP4 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.24□□□□□ -1.57
DKK3Q9UBP4 TAF13P2-201ENST00000416876 286 ntBASIC5.24□□□□□ -1.57
DKK3Q9UBP4 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC5.24□□□□□ -1.57
DKK3Q9UBP4 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.24□□□□□ -1.57
DKK3Q9UBP4 MOB1AP1-201ENST00000430903 535 ntBASIC5.24□□□□□ -1.57
DKK3Q9UBP4 MTND1P32-201ENST00000433043 938 ntBASIC5.24□□□□□ -1.57
DKK3Q9UBP4 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms