Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 ASNSP1-204ENST00000641977 1664 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 GAPDHP24-201ENST00000328713 983 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 Y_RNA.41-201ENST00000362646 102 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 RN7SKP286-201ENST00000410894 299 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 RN7SKP293-201ENST00000411389 296 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AC068533.2-201ENST00000411872 306 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AL513175.1-201ENST00000431492 780 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 TMEM183AP1-205ENST00000432739 290 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 NPM1P18-201ENST00000434232 732 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AC006335.2-201ENST00000437993 330 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 RPL36AP39-201ENST00000445859 318 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 RPS27AP15-201ENST00000447672 466 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AC108463.1-201ENST00000450258 347 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AC002553.2-201ENST00000453217 340 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 DNAJC19P1-201ENST00000455312 319 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 RPS7P7-201ENST00000463499 571 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 RN7SL197P-201ENST00000466981 299 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AC090602.1-201ENST00000469695 252 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AC015724.1-201ENST00000478577 156 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 ATP5LP5-201ENST00000483050 299 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 RPL7P51-201ENST00000490532 749 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AC096751.1-202ENST00000502691 1067 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AC109481.1-201ENST00000509173 282 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AC116347.2-201ENST00000514912 523 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 MTCO1P30-201ENST00000515244 580 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AC008802.1-201ENST00000519121 791 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AC112191.2-201ENST00000522428 333 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AP003392.2-201ENST00000527269 208 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 PMS2P3-207ENST00000529061 717 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AC016957.1-201ENST00000534895 309 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AL049872.1-201ENST00000556323 322 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 PCMTD1P2-201ENST00000565017 355 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 MIR4505-201ENST00000582238 73 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AC024941.1-201ENST00000612250 334 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AC092650.2-201ENST00000619984 902 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 AC099654.12-201ENST00000639868 649 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 LINC01739-205ENST00000641890 573 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 RNF6P1-201ENST00000444889 1784 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 TRIM51GP-201ENST00000534741 1350 ntBASIC5.8□□□□□ -1.48
PPARGC1AQ9UBK2 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
PPARGC1AQ9UBK2 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
PPARGC1AQ9UBK2 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.79□□□□□ -1.48
PPARGC1AQ9UBK2 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.79□□□□□ -1.48
PPARGC1AQ9UBK2 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PPARGC1AQ9UBK2 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.79□□□□□ -1.48
PPARGC1AQ9UBK2 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.79□□□□□ -1.48
PPARGC1AQ9UBK2 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PPARGC1AQ9UBK2 AL121886.1-201ENST00000358609 435 ntBASIC5.79□□□□□ -1.48
PPARGC1AQ9UBK2 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PPARGC1AQ9UBK2 AC005042.1-201ENST00000393397 800 ntBASIC5.79□□□□□ -1.48
PPARGC1AQ9UBK2 MTCO3P31-201ENST00000405526 789 ntBASIC5.79□□□□□ -1.48
PPARGC1AQ9UBK2 RPL23AP47-201ENST00000408017 460 ntBASIC5.79□□□□□ -1.48
PPARGC1AQ9UBK2 RNA5SP178-201ENST00000410380 128 ntBASIC5.79□□□□□ -1.48
PPARGC1AQ9UBK2 UBTFL3-201ENST00000418934 1024 ntBASIC5.79□□□□□ -1.48
PPARGC1AQ9UBK2 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.79□□□□□ -1.48
PPARGC1AQ9UBK2 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.79□□□□□ -1.48
PPARGC1AQ9UBK2 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.79□□□□□ -1.48
PPARGC1AQ9UBK2 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.79□□□□□ -1.48
PPARGC1AQ9UBK2 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.79□□□□□ -1.48
PPARGC1AQ9UBK2 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.79□□□□□ -1.48
PPARGC1AQ9UBK2 AL512286.1-201ENST00000439244 400 ntBASIC5.79□□□□□ -1.48
PPARGC1AQ9UBK2 AL353572.1-201ENST00000442490 417 ntBASIC5.79□□□□□ -1.48
PPARGC1AQ9UBK2 AP000281.1-201ENST00000444036 316 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms