Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AL353726.1-201ENST00000614041 1000 ntBASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 AC119674.1-212ENST00000641155 993 ntBASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 AL133243.3-201ENST00000617415 3004 ntBASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.82□□□□□ -1.8
CLCF1Q9UBD9 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 NOL8P1-201ENST00000508336 3529 ntBASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 RNU6-225P-201ENST00000384613 103 ntBASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 ATP5F1P2-201ENST00000398143 760 ntBASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 AL022722.2-201ENST00000402519 180 ntBASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 RPS27AP11-201ENST00000402798 447 ntBASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 RN7SKP167-201ENST00000411047 285 ntBASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 CR848007.2-201ENST00000424918 787 ntBASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 NDUFA5P10-201ENST00000432147 357 ntBASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 EEF1A1P1-201ENST00000447052 739 ntBASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 AL513343.1-201ENST00000451818 792 ntBASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 RPL7P22-201ENST00000466005 733 ntBASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 KCTD9P2-201ENST00000512203 1013 ntBASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 AC108120.2-201ENST00000512973 294 ntBASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 AC104307.1-201ENST00000616142 196 ntBASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 ZYXP1-201ENST00000617638 118 ntBASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 AC090506.2-201ENST00000624521 419 ntBASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLCF1Q9UBD9 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 IL6STP1-201ENST00000346911 1020 ntBASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 RNA5SP515-201ENST00000364570 118 ntBASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 RNU1-13P-201ENST00000384499 162 ntBASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 UBTFL3-201ENST00000418934 1024 ntBASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 MTND4LP14-201ENST00000429447 288 ntBASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 RSL24D1P8-201ENST00000434442 492 ntBASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 AC023512.1-201ENST00000444513 499 ntBASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 RPS27AP15-201ENST00000447672 466 ntBASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 AC243772.1-201ENST00000451620 410 ntBASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 MTND2P3-201ENST00000452458 470 ntBASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 RPL7AP28-201ENST00000464513 571 ntBASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 UBTFL6-201ENST00000477929 1024 ntBASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 CDH12P2-201ENST00000504393 298 ntBASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 AC021146.3-201ENST00000511911 260 ntBASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 AC099522.1-202ENST00000514718 367 ntBASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms