Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.91□□□□□ -1.62
LRFN1Q9P244 AC005252.1-201ENST00000604518 1063 ntBASIC4.91□□□□□ -1.62
LRFN1Q9P244 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LRFN1Q9P244 TUSC7.1-201ENST00000610969 165 ntBASIC4.91□□□□□ -1.62
LRFN1Q9P244 AC005332.6-201ENST00000613178 446 ntBASIC4.91□□□□□ -1.62
LRFN1Q9P244 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
LRFN1Q9P244 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LRFN1Q9P244 AC011978.2-201ENST00000569835 2054 ntBASIC4.91□□□□□ -1.62
LRFN1Q9P244 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LRFN1Q9P244 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.91□□□□□ -1.62
LRFN1Q9P244 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
LRFN1Q9P244 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.91□□□□□ -1.62
LRFN1Q9P244 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LRFN1Q9P244 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.91□□□□□ -1.62
LRFN1Q9P244 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
LRFN1Q9P244 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
LRFN1Q9P244 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LRFN1Q9P244 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
LRFN1Q9P244 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
LRFN1Q9P244 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LRFN1Q9P244 DDX18P3-201ENST00000404856 2007 ntBASIC4.9□□□□□ -1.62
LRFN1Q9P244 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
LRFN1Q9P244 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.9□□□□□ -1.62
LRFN1Q9P244 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
LRFN1Q9P244 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
LRFN1Q9P244 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.9□□□□□ -1.62
LRFN1Q9P244 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
LRFN1Q9P244 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 OR4A15-201ENST00000314706 1035 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
LRFN1Q9P244 SNORA17.1-201ENST00000362945 126 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 U3.10-201ENST00000364459 214 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 BMS1P3-201ENST00000372011 932 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 RNU6-921P-201ENST00000384361 107 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 MIR550A3-201ENST00000390735 95 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 AL645733.1-201ENST00000402250 217 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 MTCO3P1-205ENST00000422088 832 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 AC073143.1-201ENST00000436316 395 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 MTCO2P20-201ENST00000437339 673 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 AC073465.2-201ENST00000440938 498 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LRFN1Q9P244 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 AC234781.3-201ENST00000452540 973 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 NECAP1P2-201ENST00000455668 727 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 RPS20P21-201ENST00000466859 343 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 ACTG1P13-201ENST00000486987 1043 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 WBP1LP4-201ENST00000505043 344 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 GLUD1P3-202ENST00000508551 200 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 AC079395.1-201ENST00000510981 262 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 RNU6-1261P-201ENST00000517194 104 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 CDH12P4-201ENST00000517835 295 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 CDH12P3-201ENST00000517935 295 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 CDH12P1-201ENST00000518435 295 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 OR11J2P-201ENST00000555298 907 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 AC124068.1-201ENST00000563131 678 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 MTCYBP28-201ENST00000566728 1132 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 NIFKP6-201ENST00000598115 845 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 TAS2R6P-201ENST00000605022 826 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 AC080013.3-201ENST00000606839 578 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 AC231759.1-201ENST00000616455 597 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 AC090527.3-201ENST00000619041 548 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 uc_338.7-201ENST00000621834 124 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 AC098679.5-201ENST00000624394 571 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 MIR4278-201ENST00000636094 69 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LRFN1Q9P244 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
LRFN1Q9P244 AC011447.7-201ENST00000624228 1590 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 AC079097.1-201ENST00000512187 1399 ntBASIC4.9□□□□□ -1.63
LRFN1Q9P244 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.9□□□□□ -1.63
LRFN1Q9P244 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms