Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC88CQ9P219 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC88CQ9P219 SAP18P1-201ENST00000512058 390 ntBASIC3.82□□□□□ -1.8
CCDC88CQ9P219 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC88CQ9P219 MIR3653-201ENST00000625572 110 ntBASIC3.82□□□□□ -1.8
CCDC88CQ9P219 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.82□□□□□ -1.8
CCDC88CQ9P219 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC88CQ9P219 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC88CQ9P219 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC88CQ9P219 AC092162.3-201ENST00000624511 1624 ntBASIC3.82□□□□□ -1.8
CCDC88CQ9P219 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC88CQ9P219 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC88CQ9P219 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC88CQ9P219 USP9YP4-201ENST00000424401 1745 ntBASIC3.82□□□□□ -1.8
CCDC88CQ9P219 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC88CQ9P219 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CCDC88CQ9P219 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.82□□□□□ -1.8
CCDC88CQ9P219 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC88CQ9P219 FCF1P7-201ENST00000451185 558 ntBASIC3.82□□□□□ -1.8
CCDC88CQ9P219 RPS26P28-201ENST00000470806 348 ntBASIC3.82□□□□□ -1.8
CCDC88CQ9P219 AC113430.1-201ENST00000506872 718 ntBASIC3.82□□□□□ -1.8
CCDC88CQ9P219 OR8R1P-201ENST00000543943 764 ntBASIC3.82□□□□□ -1.8
CCDC88CQ9P219 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.82□□□□□ -1.8
CCDC88CQ9P219 AC124856.1-201ENST00000600819 896 ntBASIC3.82□□□□□ -1.8
CCDC88CQ9P219 AL357559.1-201ENST00000622228 274 ntBASIC3.82□□□□□ -1.8
CCDC88CQ9P219 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC88CQ9P219 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC88CQ9P219 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC88CQ9P219 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
CCDC88CQ9P219 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC88CQ9P219 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC3.81□□□□□ -1.8
CCDC88CQ9P219 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC88CQ9P219 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC88CQ9P219 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC88CQ9P219 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC88CQ9P219 ENSAP1-201ENST00000392855 326 ntBASIC3.81□□□□□ -1.8
CCDC88CQ9P219 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC88CQ9P219 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.81□□□□□ -1.8
CCDC88CQ9P219 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC88CQ9P219 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC88CQ9P219 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC88CQ9P219 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC88CQ9P219 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC88CQ9P219 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC88CQ9P219 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC88CQ9P219 FP236240.3-201ENST00000623061 327 ntBASIC3.81□□□□□ -1.8
CCDC88CQ9P219 AC112200.1-201ENST00000625015 234 ntBASIC3.81□□□□□ -1.8
CCDC88CQ9P219 MAPK10-320ENST00000641462 6696 ntBASIC3.81□□□□□ -1.8
CCDC88CQ9P219 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC88CQ9P219 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CCDC88CQ9P219 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC88CQ9P219 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC88CQ9P219 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC88CQ9P219 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC88CQ9P219 U8.11-201ENST00000384699 133 ntBASIC3.8□□□□□ -1.8
CCDC88CQ9P219 U8.12-201ENST00000384701 133 ntBASIC3.8□□□□□ -1.8
CCDC88CQ9P219 AL590704.1-201ENST00000402856 794 ntBASIC3.8□□□□□ -1.8
CCDC88CQ9P219 OR4F13P-201ENST00000428478 931 ntBASIC3.8□□□□□ -1.8
CCDC88CQ9P219 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC88CQ9P219 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC88CQ9P219 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC88CQ9P219 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC88CQ9P219 U8.18-201ENST00000459285 133 ntBASIC3.8□□□□□ -1.8
CCDC88CQ9P219 RPL23AP71-201ENST00000470966 469 ntBASIC3.8□□□□□ -1.8
CCDC88CQ9P219 MIR5684-201ENST00000585074 65 ntBASIC3.8□□□□□ -1.8
CCDC88CQ9P219 AC068020.1-201ENST00000594215 661 ntBASIC3.8□□□□□ -1.8
CCDC88CQ9P219 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC88CQ9P219 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC88CQ9P219 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC88CQ9P219 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC88CQ9P219 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC88CQ9P219 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC88CQ9P219 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC88CQ9P219 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC88CQ9P219 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC88CQ9P219 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC88CQ9P219 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC88CQ9P219 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC88CQ9P219 RNA5SP124-201ENST00000362739 110 ntBASIC3.8□□□□□ -1.8
CCDC88CQ9P219 MIR93-201ENST00000385024 80 ntBASIC3.8□□□□□ -1.8
CCDC88CQ9P219 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC88CQ9P219 MTCO1P54-201ENST00000430139 712 ntBASIC3.8□□□□□ -1.8
CCDC88CQ9P219 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC88CQ9P219 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC88CQ9P219 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC88CQ9P219 AC017037.1-201ENST00000508460 471 ntBASIC3.8□□□□□ -1.8
CCDC88CQ9P219 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC88CQ9P219 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC88CQ9P219 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC88CQ9P219 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC88CQ9P219 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC88CQ9P219 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC88CQ9P219 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC88CQ9P219 AC034105.4-201ENST00000568304 277 ntBASIC3.8□□□□□ -1.8
CCDC88CQ9P219 HMGB1P50-201ENST00000605814 607 ntBASIC3.8□□□□□ -1.8
CCDC88CQ9P219 AL008729.2-201ENST00000606393 473 ntBASIC3.8□□□□□ -1.8
CCDC88CQ9P219 AC244517.3-201ENST00000616254 1235 ntBASIC3.8□□□□□ -1.8
CCDC88CQ9P219 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC88CQ9P219 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.8□□□□□ -1.8
CCDC88CQ9P219 AC008785.1-201ENST00000624475 456 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms