Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.22□□□□□ -1.57
PHRF1Q9P1Y6 AL672167.1-205ENST00000641112 3080 ntBASIC5.22□□□□□ -1.57
PHRF1Q9P1Y6 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
PHRF1Q9P1Y6 RNU1-15P-201ENST00000353977 144 ntBASIC5.22□□□□□ -1.57
PHRF1Q9P1Y6 OR52E6-202ENST00000379946 954 ntBASIC5.22□□□□□ -1.57
PHRF1Q9P1Y6 RPS7P15-201ENST00000415804 584 ntBASIC5.22□□□□□ -1.57
PHRF1Q9P1Y6 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.22□□□□□ -1.57
PHRF1Q9P1Y6 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.22□□□□□ -1.57
PHRF1Q9P1Y6 RPS4XP12-201ENST00000461747 709 ntBASIC5.22□□□□□ -1.57
PHRF1Q9P1Y6 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.22□□□□□ -1.57
PHRF1Q9P1Y6 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.22□□□□□ -1.57
PHRF1Q9P1Y6 AL031985.2-201ENST00000600955 480 ntBASIC5.22□□□□□ -1.57
PHRF1Q9P1Y6 AL137849.1-201ENST00000604767 169 ntBASIC5.22□□□□□ -1.57
PHRF1Q9P1Y6 PCNP-208ENST00000627393 136 ntTSL 2 BASIC5.22□□□□□ -1.57
PHRF1Q9P1Y6 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
PHRF1Q9P1Y6 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
PHRF1Q9P1Y6 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PHRF1Q9P1Y6 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PHRF1Q9P1Y6 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PHRF1Q9P1Y6 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.22□□□□□ -1.57
PHRF1Q9P1Y6 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.21□□□□□ -1.57
PHRF1Q9P1Y6 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
PHRF1Q9P1Y6 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
PHRF1Q9P1Y6 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
PHRF1Q9P1Y6 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC5.21□□□□□ -1.58
PHRF1Q9P1Y6 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.21□□□□□ -1.58
PHRF1Q9P1Y6 BOLA3P4-201ENST00000418151 400 ntBASIC5.21□□□□□ -1.58
PHRF1Q9P1Y6 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.21□□□□□ -1.58
PHRF1Q9P1Y6 RN7SKP13-201ENST00000515933 244 ntBASIC5.21□□□□□ -1.58
PHRF1Q9P1Y6 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC5.21□□□□□ -1.58
PHRF1Q9P1Y6 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.21□□□□□ -1.58
PHRF1Q9P1Y6 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.21□□□□□ -1.58
PHRF1Q9P1Y6 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PHRF1Q9P1Y6 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
PHRF1Q9P1Y6 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.21□□□□□ -1.58
PHRF1Q9P1Y6 MTCO1P12-201ENST00000414273 1543 ntBASIC5.21□□□□□ -1.58
PHRF1Q9P1Y6 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PHRF1Q9P1Y6 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PHRF1Q9P1Y6 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
PHRF1Q9P1Y6 HIST1H2APS3-201ENST00000403259 134 ntBASIC5.2□□□□□ -1.58
PHRF1Q9P1Y6 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5.2□□□□□ -1.58
PHRF1Q9P1Y6 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5.2□□□□□ -1.58
PHRF1Q9P1Y6 RNU1-103P-201ENST00000516502 125 ntBASIC5.2□□□□□ -1.58
PHRF1Q9P1Y6 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.2□□□□□ -1.58
PHRF1Q9P1Y6 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.2□□□□□ -1.58
PHRF1Q9P1Y6 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.2□□□□□ -1.58
PHRF1Q9P1Y6 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC5.2□□□□□ -1.58
PHRF1Q9P1Y6 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.2□□□□□ -1.58
PHRF1Q9P1Y6 AC020914.6-201ENST00000594327 272 ntBASIC5.2□□□□□ -1.58
PHRF1Q9P1Y6 AC006363.1-201ENST00000603806 463 ntBASIC5.2□□□□□ -1.58
PHRF1Q9P1Y6 ELOCP35-201ENST00000604289 336 ntBASIC5.2□□□□□ -1.58
PHRF1Q9P1Y6 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.2□□□□□ -1.58
PHRF1Q9P1Y6 AC079684.1-201ENST00000621405 437 ntBASIC5.2□□□□□ -1.58
PHRF1Q9P1Y6 AC243312.2-201ENST00000623340 601 ntBASIC5.2□□□□□ -1.58
PHRF1Q9P1Y6 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PHRF1Q9P1Y6 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.2□□□□□ -1.58
PHRF1Q9P1Y6 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.2□□□□□ -1.58
PHRF1Q9P1Y6 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PHRF1Q9P1Y6 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PHRF1Q9P1Y6 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PHRF1Q9P1Y6 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.2□□□□□ -1.58
PHRF1Q9P1Y6 AC083899.2-201ENST00000423285 1376 ntBASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 RNA5SP267-201ENST00000364893 126 ntBASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 CYCSP4-201ENST00000429682 331 ntBASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 RPL21P23-201ENST00000446654 460 ntBASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 IGLV3-26-201ENST00000520756 302 ntBASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 AC093524.1-201ENST00000564266 1094 ntBASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 AL121839.2-201ENST00000565058 6943 ntBASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 SAMMSON-213ENST00000641336 1521 ntBASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 AC125336.1-201ENST00000508893 2827 ntBASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 OR6K3-202ENST00000368146 996 ntBASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 AL591503.2-201ENST00000442314 1005 ntBASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 SETP6-201ENST00000479329 568 ntBASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 MIR3124-201ENST00000582636 67 ntBASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 AC119674.1-207ENST00000641355 633 ntBASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 AC006484.1-201ENST00000435086 1884 ntBASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.19□□□□□ -1.58
PHRF1Q9P1Y6 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.18□□□□□ -1.58
PHRF1Q9P1Y6 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
PHRF1Q9P1Y6 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PHRF1Q9P1Y6 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
PHRF1Q9P1Y6 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
PHRF1Q9P1Y6 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms