Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AL160275.2-201ENST00000412010 394 ntBASIC4.55□□□□□ -1.68
SIX2Q9NPC8 TATDN1P1-201ENST00000414123 891 ntBASIC4.55□□□□□ -1.68
SIX2Q9NPC8 BX664727.1-201ENST00000416024 466 ntBASIC4.55□□□□□ -1.68
SIX2Q9NPC8 OR13Z1P-201ENST00000416141 834 ntBASIC4.55□□□□□ -1.68
SIX2Q9NPC8 MTCYBP7-201ENST00000419540 1134 ntBASIC4.55□□□□□ -1.68
SIX2Q9NPC8 OR2X1P-201ENST00000421144 687 ntBASIC4.55□□□□□ -1.68
SIX2Q9NPC8 AL160175.1-201ENST00000428124 247 ntBASIC4.55□□□□□ -1.68
SIX2Q9NPC8 AL132765.1-201ENST00000434165 553 ntBASIC4.55□□□□□ -1.68
SIX2Q9NPC8 RPL23AP89-201ENST00000439324 255 ntBASIC4.55□□□□□ -1.68
SIX2Q9NPC8 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.55□□□□□ -1.68
SIX2Q9NPC8 MTCYBP21-201ENST00000443300 1113 ntBASIC4.55□□□□□ -1.68
SIX2Q9NPC8 RPL7P55-201ENST00000450522 746 ntBASIC4.55□□□□□ -1.68
SIX2Q9NPC8 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.55□□□□□ -1.68
SIX2Q9NPC8 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SIX2Q9NPC8 RN7SL585P-201ENST00000470538 280 ntBASIC4.55□□□□□ -1.68
SIX2Q9NPC8 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.55□□□□□ -1.68
SIX2Q9NPC8 AC006517.1-201ENST00000480485 328 ntBASIC4.55□□□□□ -1.68
SIX2Q9NPC8 PPM1AP1-201ENST00000502740 1135 ntBASIC4.55□□□□□ -1.68
SIX2Q9NPC8 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.55□□□□□ -1.68
SIX2Q9NPC8 HAUS1P1-201ENST00000505275 832 ntBASIC4.55□□□□□ -1.68
SIX2Q9NPC8 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.55□□□□□ -1.68
SIX2Q9NPC8 HAUS1P3-201ENST00000523909 662 ntBASIC4.55□□□□□ -1.68
SIX2Q9NPC8 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.55□□□□□ -1.68
SIX2Q9NPC8 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.55□□□□□ -1.68
SIX2Q9NPC8 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SIX2Q9NPC8 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SIX2Q9NPC8 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.55□□□□□ -1.68
SIX2Q9NPC8 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.55□□□□□ -1.68
SIX2Q9NPC8 AC068790.4-201ENST00000602474 263 ntBASIC4.55□□□□□ -1.68
SIX2Q9NPC8 AC091057.3-201ENST00000602684 733 ntBASIC4.55□□□□□ -1.68
SIX2Q9NPC8 AC005191.1-201ENST00000603950 358 ntBASIC4.55□□□□□ -1.68
SIX2Q9NPC8 AC004948.1-201ENST00000609858 672 ntBASIC4.55□□□□□ -1.68
SIX2Q9NPC8 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.55□□□□□ -1.68
SIX2Q9NPC8 AC105105.5-201ENST00000622635 1294 ntBASIC4.55□□□□□ -1.68
SIX2Q9NPC8 AC092159.4-201ENST00000624944 550 ntBASIC4.55□□□□□ -1.68
SIX2Q9NPC8 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.55□□□□□ -1.68
SIX2Q9NPC8 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.55□□□□□ -1.68
SIX2Q9NPC8 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SIX2Q9NPC8 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SIX2Q9NPC8 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SIX2Q9NPC8 AC005261.2-201ENST00000593427 4258 ntBASIC4.55□□□□□ -1.68
SIX2Q9NPC8 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.55□□□□□ -1.68
SIX2Q9NPC8 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SIX2Q9NPC8 AC245100.2-201ENST00000454544 1679 ntBASIC4.54□□□□□ -1.68
SIX2Q9NPC8 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.54□□□□□ -1.68
SIX2Q9NPC8 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SIX2Q9NPC8 AC012078.1-201ENST00000405035 1646 ntBASIC4.54□□□□□ -1.68
SIX2Q9NPC8 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SIX2Q9NPC8 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SIX2Q9NPC8 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SIX2Q9NPC8 RNA5SP388-201ENST00000362584 119 ntBASIC4.54□□□□□ -1.68
SIX2Q9NPC8 RNU6-252P-201ENST00000363232 107 ntBASIC4.54□□□□□ -1.68
SIX2Q9NPC8 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.54□□□□□ -1.68
SIX2Q9NPC8 RNU1-132P-201ENST00000364300 164 ntBASIC4.54□□□□□ -1.68
SIX2Q9NPC8 RHOT1P2-201ENST00000366423 333 ntBASIC4.54□□□□□ -1.68
SIX2Q9NPC8 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SIX2Q9NPC8 MIR93-201ENST00000385024 80 ntBASIC4.54□□□□□ -1.68
SIX2Q9NPC8 U3.22-201ENST00000391120 215 ntBASIC4.54□□□□□ -1.68
SIX2Q9NPC8 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.54□□□□□ -1.68
SIX2Q9NPC8 RPL26P29-201ENST00000415623 438 ntBASIC4.54□□□□□ -1.68
SIX2Q9NPC8 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.54□□□□□ -1.68
SIX2Q9NPC8 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.54□□□□□ -1.68
SIX2Q9NPC8 AC011998.1-201ENST00000433403 117 ntBASIC4.54□□□□□ -1.68
SIX2Q9NPC8 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.54□□□□□ -1.68
SIX2Q9NPC8 RPS3AP54-201ENST00000435535 734 ntBASIC4.54□□□□□ -1.68
SIX2Q9NPC8 MTCYBP29-201ENST00000436327 1006 ntBASIC4.54□□□□□ -1.68
SIX2Q9NPC8 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC4.54□□□□□ -1.68
SIX2Q9NPC8 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.54□□□□□ -1.68
SIX2Q9NPC8 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.54□□□□□ -1.68
SIX2Q9NPC8 SBDSP1-204ENST00000453858 737 ntBASIC4.54□□□□□ -1.68
SIX2Q9NPC8 RPL7P32-201ENST00000457119 744 ntBASIC4.54□□□□□ -1.68
SIX2Q9NPC8 AC008379.1-201ENST00000463655 464 ntBASIC4.54□□□□□ -1.68
SIX2Q9NPC8 RPL5P22-201ENST00000480199 884 ntBASIC4.54□□□□□ -1.68
SIX2Q9NPC8 SYT14P1-201ENST00000481459 721 ntBASIC4.54□□□□□ -1.68
SIX2Q9NPC8 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.54□□□□□ -1.68
SIX2Q9NPC8 TRAV31-201ENST00000502780 342 ntBASIC4.54□□□□□ -1.68
SIX2Q9NPC8 AL592156.1-201ENST00000508758 304 ntBASIC4.54□□□□□ -1.68
SIX2Q9NPC8 PARP4P3-201ENST00000510265 317 ntBASIC4.54□□□□□ -1.68
SIX2Q9NPC8 OR5M7P-201ENST00000526140 972 ntBASIC4.54□□□□□ -1.68
SIX2Q9NPC8 AP003066.2-201ENST00000529375 555 ntBASIC4.54□□□□□ -1.68
SIX2Q9NPC8 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SIX2Q9NPC8 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SIX2Q9NPC8 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SIX2Q9NPC8 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.54□□□□□ -1.68
SIX2Q9NPC8 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.54□□□□□ -1.68
SIX2Q9NPC8 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.54□□□□□ -1.68
SIX2Q9NPC8 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.54□□□□□ -1.68
SIX2Q9NPC8 MIR4433B-201ENST00000581329 102 ntBASIC4.54□□□□□ -1.68
SIX2Q9NPC8 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.54□□□□□ -1.68
SIX2Q9NPC8 AC008745.1-201ENST00000604064 271 ntBASIC4.54□□□□□ -1.68
SIX2Q9NPC8 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.54□□□□□ -1.68
SIX2Q9NPC8 AC116651.1-201ENST00000609724 556 ntBASIC4.54□□□□□ -1.68
SIX2Q9NPC8 AC015813.4-201ENST00000610469 179 ntBASIC4.54□□□□□ -1.68
SIX2Q9NPC8 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SIX2Q9NPC8 FAM27D1-201ENST00000612308 341 ntBASIC4.54□□□□□ -1.68
SIX2Q9NPC8 AC073342.3-201ENST00000624211 193 ntBASIC4.54□□□□□ -1.68
SIX2Q9NPC8 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.54□□□□□ -1.68
SIX2Q9NPC8 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.54□□□□□ -1.68
SIX2Q9NPC8 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SIX2Q9NPC8 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms