Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 SNORA3.3-201ENST00000408712 125 ntBASIC6.01□□□□□ -1.45
SCAPERQ9BY12 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC6.01□□□□□ -1.45
SCAPERQ9BY12 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC6.01□□□□□ -1.45
SCAPERQ9BY12 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC6.01□□□□□ -1.45
SCAPERQ9BY12 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC6.01□□□□□ -1.45
SCAPERQ9BY12 MTND1P6-201ENST00000523621 946 ntBASIC6.01□□□□□ -1.45
SCAPERQ9BY12 AC107016.1-201ENST00000550463 337 ntBASIC6.01□□□□□ -1.45
SCAPERQ9BY12 RPL23AP87-202ENST00000573039 466 ntBASIC6.01□□□□□ -1.45
SCAPERQ9BY12 EIF4A2P1-201ENST00000587313 1063 ntBASIC6.01□□□□□ -1.45
SCAPERQ9BY12 AL031985.2-201ENST00000600955 480 ntBASIC6.01□□□□□ -1.45
SCAPERQ9BY12 AC005000.2-201ENST00000605468 310 ntBASIC6.01□□□□□ -1.45
SCAPERQ9BY12 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6.01□□□□□ -1.45
SCAPERQ9BY12 OR7M1P-201ENST00000608946 533 ntBASIC6.01□□□□□ -1.45
SCAPERQ9BY12 AC005858.4-201ENST00000623191 700 ntBASIC6.01□□□□□ -1.45
SCAPERQ9BY12 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SCAPERQ9BY12 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SCAPERQ9BY12 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SCAPERQ9BY12 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SCAPERQ9BY12 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SCAPERQ9BY12 DDX18P4-201ENST00000511690 1966 ntBASIC6.01□□□□□ -1.45
SCAPERQ9BY12 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
SCAPERQ9BY12 AP000542.2-201ENST00000623199 6179 ntBASIC6.01□□□□□ -1.45
SCAPERQ9BY12 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC6□□□□□ -1.45
SCAPERQ9BY12 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC6□□□□□ -1.45
SCAPERQ9BY12 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
SCAPERQ9BY12 AL035423.1-201ENST00000420331 213 ntBASIC6□□□□□ -1.45
SCAPERQ9BY12 AC004448.2-201ENST00000422360 586 ntBASIC6□□□□□ -1.45
SCAPERQ9BY12 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC6□□□□□ -1.45
SCAPERQ9BY12 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC6□□□□□ -1.45
SCAPERQ9BY12 TMX2P1-201ENST00000436507 708 ntBASIC6□□□□□ -1.45
SCAPERQ9BY12 AC119751.5-201ENST00000514077 770 ntBASIC6□□□□□ -1.45
SCAPERQ9BY12 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
SCAPERQ9BY12 SNX6P1-201ENST00000601728 1224 ntBASIC6□□□□□ -1.45
SCAPERQ9BY12 ELOCP35-201ENST00000604289 336 ntBASIC6□□□□□ -1.45
SCAPERQ9BY12 MIR3651-201ENST00000630427 90 ntBASIC6□□□□□ -1.45
SCAPERQ9BY12 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC6□□□□□ -1.45
SCAPERQ9BY12 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SCAPERQ9BY12 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6□□□□□ -1.45
SCAPERQ9BY12 PRO1804-201ENST00000623780 2050 ntBASIC6□□□□□ -1.45
SCAPERQ9BY12 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SCAPERQ9BY12 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC6□□□□□ -1.45
SCAPERQ9BY12 Y_RNA.111-201ENST00000363248 100 ntBASIC5.99□□□□□ -1.45
SCAPERQ9BY12 RNA5SP97-201ENST00000365006 84 ntBASIC5.99□□□□□ -1.45
SCAPERQ9BY12 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.99□□□□□ -1.45
SCAPERQ9BY12 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SCAPERQ9BY12 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.99□□□□□ -1.45
SCAPERQ9BY12 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.99□□□□□ -1.45
SCAPERQ9BY12 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SCAPERQ9BY12 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SCAPERQ9BY12 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.99□□□□□ -1.45
SCAPERQ9BY12 AC244505.7-201ENST00000599675 272 ntBASIC5.99□□□□□ -1.45
SCAPERQ9BY12 AC026368.1-201ENST00000614934 690 ntBASIC5.99□□□□□ -1.45
SCAPERQ9BY12 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.99□□□□□ -1.45
SCAPERQ9BY12 AL138721.1-201ENST00000616756 179 ntBASIC5.99□□□□□ -1.45
SCAPERQ9BY12 AL121890.2-201ENST00000617644 465 ntBASIC5.99□□□□□ -1.45
SCAPERQ9BY12 PCNP-208ENST00000627393 136 ntTSL 2 BASIC5.99□□□□□ -1.45
SCAPERQ9BY12 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
SCAPERQ9BY12 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.99□□□□□ -1.45
SCAPERQ9BY12 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
SCAPERQ9BY12 AC074029.4-201ENST00000624796 1859 ntBASIC5.99□□□□□ -1.45
SCAPERQ9BY12 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.99□□□□□ -1.45
SCAPERQ9BY12 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SCAPERQ9BY12 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC5.99□□□□□ -1.45
SCAPERQ9BY12 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SCAPERQ9BY12 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SCAPERQ9BY12 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SCAPERQ9BY12 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.99□□□□□ -1.45
SCAPERQ9BY12 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC5.99□□□□□ -1.45
SCAPERQ9BY12 ARL4AP3-201ENST00000441452 574 ntBASIC5.99□□□□□ -1.45
SCAPERQ9BY12 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.99□□□□□ -1.45
SCAPERQ9BY12 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5.99□□□□□ -1.45
SCAPERQ9BY12 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SCAPERQ9BY12 PHBP17-201ENST00000528576 541 ntBASIC5.99□□□□□ -1.45
SCAPERQ9BY12 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SCAPERQ9BY12 AC106782.4-201ENST00000568264 210 ntBASIC5.99□□□□□ -1.45
SCAPERQ9BY12 AC090246.1-201ENST00000616499 426 ntBASIC5.99□□□□□ -1.45
SCAPERQ9BY12 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.98□□□□□ -1.45
SCAPERQ9BY12 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SCAPERQ9BY12 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
SCAPERQ9BY12 AC126323.6-202ENST00000568092 3511 ntBASIC5.98□□□□□ -1.45
SCAPERQ9BY12 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
SCAPERQ9BY12 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
SCAPERQ9BY12 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SCAPERQ9BY12 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
SCAPERQ9BY12 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.98□□□□□ -1.45
SCAPERQ9BY12 SNORD35B-201ENST00000363660 87 ntBASIC5.98□□□□□ -1.45
SCAPERQ9BY12 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SCAPERQ9BY12 RN7SKP199-201ENST00000410325 305 ntBASIC5.98□□□□□ -1.45
SCAPERQ9BY12 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.98□□□□□ -1.45
SCAPERQ9BY12 AC115115.1-201ENST00000449927 248 ntBASIC5.98□□□□□ -1.45
SCAPERQ9BY12 AP000942.1-201ENST00000463969 747 ntBASIC5.98□□□□□ -1.45
SCAPERQ9BY12 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.98□□□□□ -1.45
SCAPERQ9BY12 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.98□□□□□ -1.45
SCAPERQ9BY12 AL390334.1-201ENST00000556395 450 ntBASIC5.98□□□□□ -1.45
SCAPERQ9BY12 RPL21P7-201ENST00000557463 483 ntBASIC5.98□□□□□ -1.45
SCAPERQ9BY12 AC008759.1-201ENST00000589783 983 ntBASIC5.98□□□□□ -1.45
SCAPERQ9BY12 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.98□□□□□ -1.45
SCAPERQ9BY12 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
SCAPERQ9BY12 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SCAPERQ9BY12 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms