Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 SNORA60-201ENST00000362396 134 ntBASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 SNORD35B-201ENST00000363660 87 ntBASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 RNU1-132P-201ENST00000364300 164 ntBASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 AC092642.1-201ENST00000392417 425 ntBASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 RPS29P17-201ENST00000430795 166 ntBASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 RPL12P28-201ENST00000430852 489 ntBASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 AC092809.1-201ENST00000441469 474 ntBASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 AL357520.1-201ENST00000441557 453 ntBASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 RPL7AP52-201ENST00000458096 790 ntBASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 RN7SL481P-201ENST00000477764 299 ntBASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 AC005798.1-201ENST00000513715 387 ntBASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 AC117525.1-201ENST00000515228 503 ntBASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 AC015911.5-201ENST00000587076 451 ntBASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 EIF1P6-201ENST00000600054 334 ntBASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 AL133247.2-201ENST00000603236 482 ntBASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 AC117490.2-201ENST00000610042 594 ntBASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 AC124312.6-202ENST00000623624 418 ntBASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 CASC19-222ENST00000641321 1173 ntBASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 MAPK10-372ENST00000641954 3413 ntBASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
BPIFA3Q9BQP9 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.46□□□□□ -1.69
BPIFA3Q9BQP9 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
BPIFA3Q9BQP9 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
BPIFA3Q9BQP9 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
BPIFA3Q9BQP9 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.46□□□□□ -1.7
BPIFA3Q9BQP9 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.46□□□□□ -1.7
BPIFA3Q9BQP9 RNU6-304P-201ENST00000364855 107 ntBASIC4.46□□□□□ -1.7
BPIFA3Q9BQP9 RNU6-146P-201ENST00000384602 108 ntBASIC4.46□□□□□ -1.7
BPIFA3Q9BQP9 HMGB3P19-201ENST00000403971 560 ntBASIC4.46□□□□□ -1.7
BPIFA3Q9BQP9 AC019050.1-201ENST00000418508 492 ntBASIC4.46□□□□□ -1.7
BPIFA3Q9BQP9 RPL12P34-201ENST00000424532 479 ntBASIC4.46□□□□□ -1.7
BPIFA3Q9BQP9 AL590762.4-201ENST00000425885 253 ntBASIC4.46□□□□□ -1.7
BPIFA3Q9BQP9 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.46□□□□□ -1.7
BPIFA3Q9BQP9 MTCYBP29-201ENST00000436327 1006 ntBASIC4.46□□□□□ -1.7
BPIFA3Q9BQP9 RPL7P28-201ENST00000437739 740 ntBASIC4.46□□□□□ -1.7
BPIFA3Q9BQP9 HMGB1P37-201ENST00000439613 609 ntBASIC4.46□□□□□ -1.7
BPIFA3Q9BQP9 AL157884.3-201ENST00000448273 1184 ntBASIC4.46□□□□□ -1.7
BPIFA3Q9BQP9 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.46□□□□□ -1.7
BPIFA3Q9BQP9 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.46□□□□□ -1.7
BPIFA3Q9BQP9 METTL15P1-201ENST00000481421 1045 ntBASIC4.46□□□□□ -1.7
BPIFA3Q9BQP9 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.46□□□□□ -1.7
BPIFA3Q9BQP9 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.46□□□□□ -1.7
BPIFA3Q9BQP9 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
BPIFA3Q9BQP9 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.46□□□□□ -1.7
BPIFA3Q9BQP9 AL133457.1-201ENST00000564251 987 ntBASIC4.46□□□□□ -1.7
BPIFA3Q9BQP9 AC093765.1-201ENST00000603758 881 ntBASIC4.46□□□□□ -1.7
BPIFA3Q9BQP9 AC090953.1-201ENST00000604305 1092 ntBASIC4.46□□□□□ -1.7
BPIFA3Q9BQP9 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
BPIFA3Q9BQP9 AL137100.1-201ENST00000556703 1620 ntBASIC4.46□□□□□ -1.7
BPIFA3Q9BQP9 CYP1D1P-201ENST00000416662 1433 ntBASIC4.46□□□□□ -1.7
BPIFA3Q9BQP9 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.46□□□□□ -1.7
BPIFA3Q9BQP9 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
BPIFA3Q9BQP9 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
BPIFA3Q9BQP9 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.45□□□□□ -1.7
BPIFA3Q9BQP9 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
BPIFA3Q9BQP9 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
BPIFA3Q9BQP9 MIR550A3-201ENST00000390735 95 ntBASIC4.45□□□□□ -1.7
BPIFA3Q9BQP9 ATP5F1P4-201ENST00000397288 746 ntBASIC4.45□□□□□ -1.7
BPIFA3Q9BQP9 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.45□□□□□ -1.7
BPIFA3Q9BQP9 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.45□□□□□ -1.7
BPIFA3Q9BQP9 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.45□□□□□ -1.7
BPIFA3Q9BQP9 BTF3P10-201ENST00000433415 495 ntBASIC4.45□□□□□ -1.7
BPIFA3Q9BQP9 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.45□□□□□ -1.7
BPIFA3Q9BQP9 BUD31P2-201ENST00000449374 300 ntBASIC4.45□□□□□ -1.7
BPIFA3Q9BQP9 RNU6-1218P-201ENST00000458990 108 ntBASIC4.45□□□□□ -1.7
BPIFA3Q9BQP9 AC092691.2-201ENST00000461787 803 ntBASIC4.45□□□□□ -1.7
BPIFA3Q9BQP9 RPS4XP14-201ENST00000493072 781 ntBASIC4.45□□□□□ -1.7
BPIFA3Q9BQP9 AC004069.2-201ENST00000505438 1114 ntBASIC4.45□□□□□ -1.7
BPIFA3Q9BQP9 SEC11B-201ENST00000518383 499 ntBASIC4.45□□□□□ -1.7
BPIFA3Q9BQP9 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.45□□□□□ -1.7
BPIFA3Q9BQP9 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.45□□□□□ -1.7
BPIFA3Q9BQP9 AC025627.2-201ENST00000576220 160 ntBASIC4.45□□□□□ -1.7
BPIFA3Q9BQP9 MIR4480-201ENST00000582492 71 ntBASIC4.45□□□□□ -1.7
BPIFA3Q9BQP9 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.45□□□□□ -1.7
BPIFA3Q9BQP9 BMS1P7-201ENST00000602440 1052 ntBASIC4.45□□□□□ -1.7
BPIFA3Q9BQP9 AC005191.1-201ENST00000603950 358 ntBASIC4.45□□□□□ -1.7
BPIFA3Q9BQP9 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.45□□□□□ -1.7
BPIFA3Q9BQP9 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
BPIFA3Q9BQP9 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
BPIFA3Q9BQP9 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
BPIFA3Q9BQP9 Z82217.1-201ENST00000625157 8149 ntBASIC4.45□□□□□ -1.7
BPIFA3Q9BQP9 AC114546.3-201ENST00000623582 1734 ntBASIC4.44□□□□□ -1.7
BPIFA3Q9BQP9 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
BPIFA3Q9BQP9 AC087565.3-202ENST00000642085 1603 ntBASIC4.44□□□□□ -1.7
BPIFA3Q9BQP9 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
BPIFA3Q9BQP9 RNU4-25P-201ENST00000410569 230 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms