Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5.28□□□□□ -1.56
SMOQ99835 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SMOQ99835 SYPL1P1-201ENST00000473622 768 ntBASIC5.28□□□□□ -1.56
SMOQ99835 RN7SL319P-201ENST00000480656 221 ntBASIC5.28□□□□□ -1.56
SMOQ99835 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.28□□□□□ -1.56
SMOQ99835 BTF3P13-201ENST00000513224 490 ntBASIC5.28□□□□□ -1.56
SMOQ99835 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.28□□□□□ -1.56
SMOQ99835 IGKV2D-10-201ENST00000520194 281 ntBASIC5.28□□□□□ -1.56
SMOQ99835 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
SMOQ99835 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
SMOQ99835 POLR2KP1-201ENST00000553226 168 ntBASIC5.28□□□□□ -1.56
SMOQ99835 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.28□□□□□ -1.56
SMOQ99835 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.28□□□□□ -1.56
SMOQ99835 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.28□□□□□ -1.56
SMOQ99835 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SMOQ99835 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.28□□□□□ -1.56
SMOQ99835 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.28□□□□□ -1.56
SMOQ99835 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.28□□□□□ -1.56
SMOQ99835 AC018695.5-201ENST00000605872 315 ntBASIC5.28□□□□□ -1.56
SMOQ99835 HULC.1-201ENST00000612720 240 ntBASIC5.28□□□□□ -1.56
SMOQ99835 MIR6730-201ENST00000622213 67 ntBASIC5.28□□□□□ -1.56
SMOQ99835 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SMOQ99835 SCARNA15-201ENST00000607520 4325 ntBASIC5.28□□□□□ -1.56
SMOQ99835 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.28□□□□□ -1.56
SMOQ99835 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SMOQ99835 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.28□□□□□ -1.56
SMOQ99835 NLRP3P1-201ENST00000622303 1785 ntBASIC5.28□□□□□ -1.56
SMOQ99835 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SMOQ99835 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SMOQ99835 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SMOQ99835 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.28□□□□□ -1.56
SMOQ99835 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.28□□□□□ -1.56
SMOQ99835 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SMOQ99835 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SMOQ99835 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SMOQ99835 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SMOQ99835 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SMOQ99835 AC093671.1-201ENST00000624981 2929 ntBASIC5.27□□□□□ -1.57
SMOQ99835 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SMOQ99835 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.27□□□□□ -1.57
SMOQ99835 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SMOQ99835 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SMOQ99835 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SMOQ99835 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SMOQ99835 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SMOQ99835 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SMOQ99835 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SMOQ99835 OR56B2P-201ENST00000317102 954 ntBASIC5.27□□□□□ -1.57
SMOQ99835 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SMOQ99835 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SMOQ99835 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
SMOQ99835 PEX12P1-201ENST00000400284 1048 ntBASIC5.27□□□□□ -1.57
SMOQ99835 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.27□□□□□ -1.57
SMOQ99835 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.27□□□□□ -1.57
SMOQ99835 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.27□□□□□ -1.57
SMOQ99835 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.27□□□□□ -1.57
SMOQ99835 RPS27P18-201ENST00000431701 247 ntBASIC5.27□□□□□ -1.57
SMOQ99835 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.27□□□□□ -1.57
SMOQ99835 ATP5F1P1-201ENST00000433775 569 ntBASIC5.27□□□□□ -1.57
SMOQ99835 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.27□□□□□ -1.57
SMOQ99835 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.27□□□□□ -1.57
SMOQ99835 CYCSP11-201ENST00000436426 315 ntBASIC5.27□□□□□ -1.57
SMOQ99835 MTCYBP34-201ENST00000439552 670 ntBASIC5.27□□□□□ -1.57
SMOQ99835 GTF3AP5-201ENST00000442645 697 ntBASIC5.27□□□□□ -1.57
SMOQ99835 MTCYBP3-201ENST00000445588 1137 ntBASIC5.27□□□□□ -1.57
SMOQ99835 SBDSP1-204ENST00000453858 737 ntBASIC5.27□□□□□ -1.57
SMOQ99835 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.27□□□□□ -1.57
SMOQ99835 RNU7-27P-201ENST00000459281 62 ntBASIC5.27□□□□□ -1.57
SMOQ99835 RPL35AP28-201ENST00000459730 331 ntBASIC5.27□□□□□ -1.57
SMOQ99835 TRBV8-2-201ENST00000475637 270 ntBASIC5.27□□□□□ -1.57
SMOQ99835 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.27□□□□□ -1.57
SMOQ99835 AC091544.1-201ENST00000484702 348 ntBASIC5.27□□□□□ -1.57
SMOQ99835 AC080014.1-201ENST00000496877 1201 ntBASIC5.27□□□□□ -1.57
SMOQ99835 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.27□□□□□ -1.57
SMOQ99835 MTND5P13-201ENST00000513046 1079 ntBASIC5.27□□□□□ -1.57
SMOQ99835 AC020937.1-201ENST00000519677 1013 ntBASIC5.27□□□□□ -1.57
SMOQ99835 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SMOQ99835 AP001922.4-201ENST00000526967 290 ntBASIC5.27□□□□□ -1.57
SMOQ99835 OR4C2P-201ENST00000530855 1064 ntBASIC5.27□□□□□ -1.57
SMOQ99835 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC5.27□□□□□ -1.57
SMOQ99835 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.27□□□□□ -1.57
SMOQ99835 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.27□□□□□ -1.57
SMOQ99835 AC116553.2-201ENST00000564203 463 ntBASIC5.27□□□□□ -1.57
SMOQ99835 MIR4999-201ENST00000585029 91 ntBASIC5.27□□□□□ -1.57
SMOQ99835 AC010487.1-201ENST00000594408 1172 ntBASIC5.27□□□□□ -1.57
SMOQ99835 VN1R90P-201ENST00000595717 726 ntBASIC5.27□□□□□ -1.57
SMOQ99835 VN1R88P-201ENST00000596787 292 ntBASIC5.27□□□□□ -1.57
SMOQ99835 BNIP3P26-201ENST00000600827 554 ntBASIC5.27□□□□□ -1.57
SMOQ99835 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.27□□□□□ -1.57
SMOQ99835 AL590229.1-201ENST00000603497 542 ntBASIC5.27□□□□□ -1.57
SMOQ99835 AC013562.2-201ENST00000611632 603 ntBASIC5.27□□□□□ -1.57
SMOQ99835 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.27□□□□□ -1.57
SMOQ99835 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.27□□□□□ -1.57
SMOQ99835 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.27□□□□□ -1.57
SMOQ99835 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
SMOQ99835 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SMOQ99835 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SMOQ99835 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
SMOQ99835 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.27□□□□□ -1.57
SMOQ99835 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms