Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 AC022360.1-201ENST00000521058 340 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 AC022832.1-201ENST00000530718 645 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 HAUS8P1-201ENST00000549005 542 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 AC011611.5-201ENST00000552477 578 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 AC116553.2-201ENST00000564203 463 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 RPL10P14-201ENST00000565265 298 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 TPRKBP2-201ENST00000565969 475 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 MIR7853-201ENST00000584820 132 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 AC078795.3-201ENST00000602913 472 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 AC009027.1-201ENST00000604510 479 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 AL445222.1-201ENST00000607259 628 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 AC126915.2-201ENST00000610957 190 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 AL121612.2-201ENST00000612261 482 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 AC090527.3-201ENST00000619041 548 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 AC074140.1-201ENST00000621617 208 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 OR52B5P-202ENST00000641118 1110 ntBASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CDK5RAP1Q96SZ6 MRRFP1-201ENST00000435941 1675 ntBASIC5.59□□□□□ -1.52
CDK5RAP1Q96SZ6 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CDK5RAP1Q96SZ6 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CDK5RAP1Q96SZ6 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 TCP11X1-202ENST00000622971 1372 ntBASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 Y_RNA.61-201ENST00000362835 102 ntBASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 Y_RNA.554-201ENST00000384672 102 ntBASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 MIR105-2-201ENST00000385083 81 ntBASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 PPIAP9-201ENST00000403866 498 ntBASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 AC007899.1-201ENST00000412776 775 ntBASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 RPL35AP24-201ENST00000413846 330 ntBASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 NANOGP4-201ENST00000427230 913 ntBASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 AC010975.2-201ENST00000427781 588 ntBASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 MTCO2P11-201ENST00000431069 680 ntBASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 TRIM60P8Y-201ENST00000436338 762 ntBASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 AL137845.2-201ENST00000444292 988 ntBASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 MTCYBP42-201ENST00000444653 1130 ntBASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 EEF1E1P1-201ENST00000446998 430 ntBASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 FGF7P6-202ENST00000451282 293 ntBASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 AC023050.1-201ENST00000498198 304 ntBASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 RNU6-941P-201ENST00000516346 108 ntBASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 SCARNA20.4-201ENST00000516969 131 ntBASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 DEFB130C-202ENST00000530001 230 ntBASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 AL157786.1-207ENST00000627771 695 ntBASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 ZNF849P-201ENST00000594711 1566 ntBASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CDK5RAP1Q96SZ6 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 196.7 ms