Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 SNRPCP3-201ENST00000474888 476 ntBASIC6.44□□□□□ -1.38
IFT140Q96RY7 CYCSP28-201ENST00000534284 321 ntBASIC6.44□□□□□ -1.38
IFT140Q96RY7 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC6.44□□□□□ -1.38
IFT140Q96RY7 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
IFT140Q96RY7 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
IFT140Q96RY7 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC6.44□□□□□ -1.38
IFT140Q96RY7 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.44□□□□□ -1.38
IFT140Q96RY7 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
IFT140Q96RY7 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
IFT140Q96RY7 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
IFT140Q96RY7 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
IFT140Q96RY7 AC126323.6-202ENST00000568092 3511 ntBASIC6.43□□□□□ -1.38
IFT140Q96RY7 AL512649.1-201ENST00000428997 581 ntBASIC6.43□□□□□ -1.38
IFT140Q96RY7 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC6.43□□□□□ -1.38
IFT140Q96RY7 AP005205.1-201ENST00000563503 508 ntBASIC6.43□□□□□ -1.38
IFT140Q96RY7 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC6.43□□□□□ -1.38
IFT140Q96RY7 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC6.43□□□□□ -1.38
IFT140Q96RY7 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
IFT140Q96RY7 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
IFT140Q96RY7 AC097461.1-201ENST00000568928 2821 ntBASIC6.43□□□□□ -1.38
IFT140Q96RY7 BDP1P-201ENST00000582658 1990 ntBASIC6.43□□□□□ -1.38
IFT140Q96RY7 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
IFT140Q96RY7 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
IFT140Q96RY7 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.43□□□□□ -1.38
IFT140Q96RY7 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
IFT140Q96RY7 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
IFT140Q96RY7 SOD2P1-201ENST00000396543 562 ntBASIC6.42□□□□□ -1.38
IFT140Q96RY7 VN1R51P-201ENST00000411675 945 ntBASIC6.42□□□□□ -1.38
IFT140Q96RY7 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC6.42□□□□□ -1.38
IFT140Q96RY7 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC6.42□□□□□ -1.38
IFT140Q96RY7 DEFB109A-201ENST00000482450 265 ntBASIC6.42□□□□□ -1.38
IFT140Q96RY7 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC6.42□□□□□ -1.38
IFT140Q96RY7 RNA5SP164-201ENST00000516533 110 ntBASIC6.42□□□□□ -1.38
IFT140Q96RY7 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.42□□□□□ -1.38
IFT140Q96RY7 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
IFT140Q96RY7 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
IFT140Q96RY7 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
IFT140Q96RY7 AC120036.2-201ENST00000509729 1474 ntBASIC6.42□□□□□ -1.38
IFT140Q96RY7 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.42□□□□□ -1.38
IFT140Q96RY7 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
IFT140Q96RY7 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
IFT140Q96RY7 AC004656.1-201ENST00000568479 4951 ntBASIC6.42□□□□□ -1.38
IFT140Q96RY7 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
IFT140Q96RY7 U3.26-201ENST00000391236 204 ntBASIC6.41□□□□□ -1.38
IFT140Q96RY7 NPM1P37-201ENST00000403105 874 ntBASIC6.41□□□□□ -1.38
IFT140Q96RY7 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
IFT140Q96RY7 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC6.41□□□□□ -1.38
IFT140Q96RY7 RPL23AP89-201ENST00000439324 255 ntBASIC6.41□□□□□ -1.38
IFT140Q96RY7 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC6.41□□□□□ -1.38
IFT140Q96RY7 RBMY2UP-201ENST00000453474 324 ntBASIC6.41□□□□□ -1.38
IFT140Q96RY7 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.41□□□□□ -1.38
IFT140Q96RY7 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.41□□□□□ -1.38
IFT140Q96RY7 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC6.41□□□□□ -1.38
IFT140Q96RY7 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.41□□□□□ -1.38
IFT140Q96RY7 GNRHR2P1-201ENST00000555315 631 ntBASIC6.41□□□□□ -1.38
IFT140Q96RY7 MIR4325-201ENST00000583049 90 ntBASIC6.41□□□□□ -1.38
IFT140Q96RY7 ATE1-AS1-202ENST00000636460 506 ntBASIC6.41□□□□□ -1.38
IFT140Q96RY7 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
IFT140Q96RY7 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
IFT140Q96RY7 AC118273.1-201ENST00000525324 3006 ntBASIC6.41□□□□□ -1.38
IFT140Q96RY7 AL672167.1-204ENST00000641875 3017 ntBASIC6.41□□□□□ -1.38
IFT140Q96RY7 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC6.41□□□□□ -1.38
IFT140Q96RY7 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
IFT140Q96RY7 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
IFT140Q96RY7 AP000473.2-201ENST00000602659 1537 ntBASIC6.41□□□□□ -1.38
IFT140Q96RY7 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.41□□□□□ -1.38
IFT140Q96RY7 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.41□□□□□ -1.38
IFT140Q96RY7 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
IFT140Q96RY7 AL442128.2-201ENST00000620246 1824 ntBASIC6.41□□□□□ -1.38
IFT140Q96RY7 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
IFT140Q96RY7 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
IFT140Q96RY7 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
IFT140Q96RY7 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
IFT140Q96RY7 RNA5SP50-201ENST00000363731 107 ntBASIC6.41□□□□□ -1.38
IFT140Q96RY7 PEX12P1-201ENST00000400284 1048 ntBASIC6.41□□□□□ -1.38
IFT140Q96RY7 FTH1P9-201ENST00000513251 355 ntBASIC6.41□□□□□ -1.38
IFT140Q96RY7 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
IFT140Q96RY7 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC6.41□□□□□ -1.38
IFT140Q96RY7 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC6.41□□□□□ -1.38
IFT140Q96RY7 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
IFT140Q96RY7 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
IFT140Q96RY7 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
IFT140Q96RY7 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
IFT140Q96RY7 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
IFT140Q96RY7 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC6.4□□□□□ -1.38
IFT140Q96RY7 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.4□□□□□ -1.38
IFT140Q96RY7 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.38
IFT140Q96RY7 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
IFT140Q96RY7 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
IFT140Q96RY7 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
IFT140Q96RY7 SNORA48.5-201ENST00000391143 135 ntBASIC6.4□□□□□ -1.39
IFT140Q96RY7 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
IFT140Q96RY7 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC6.4□□□□□ -1.39
IFT140Q96RY7 MTCO1P45-201ENST00000431457 267 ntBASIC6.4□□□□□ -1.39
IFT140Q96RY7 AC073063.1-201ENST00000434352 607 ntBASIC6.4□□□□□ -1.39
IFT140Q96RY7 AC005019.1-201ENST00000436455 431 ntBASIC6.4□□□□□ -1.39
IFT140Q96RY7 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
IFT140Q96RY7 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC6.4□□□□□ -1.39
IFT140Q96RY7 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC6.4□□□□□ -1.39
IFT140Q96RY7 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms