Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 Y_RNA.1-201ENST00000352915 104 ntBASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 RNU6-878P-201ENST00000384578 110 ntBASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 U3.25-201ENST00000391209 220 ntBASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 RPS3AP36-201ENST00000398190 775 ntBASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 DNAJA1P4-201ENST00000406473 1166 ntBASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 SNORA11B-201ENST00000408175 129 ntBASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 MIR1303-201ENST00000408625 86 ntBASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 RPL36P18-201ENST00000419316 318 ntBASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 NIPA2P1-201ENST00000426223 976 ntBASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 AC127526.2-201ENST00000426436 775 ntBASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 AL445928.1-201ENST00000435545 222 ntBASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 RPL7P11-201ENST00000437586 658 ntBASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 SKP1P1-201ENST00000438081 489 ntBASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 FABP5P2-201ENST00000439042 408 ntBASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 AC104164.1-201ENST00000460282 590 ntBASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 RNA5SP362-201ENST00000516048 118 ntBASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 RNU6-885P-201ENST00000516607 104 ntBASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 SNORA70.20-201ENST00000516848 126 ntBASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 IGHVIII-67-4-201ENST00000524281 296 ntBASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 AC109635.6-201ENST00000525487 1113 ntBASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 AC007448.1-201ENST00000582714 234 ntBASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 MIR4795-201ENST00000584182 89 ntBASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 AC010928.3-201ENST00000587712 541 ntBASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 AC116563.2-201ENST00000624751 535 ntBASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 AL049767.1-202ENST00000637826 242 ntBASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 AC138915.3-201ENST00000562908 1389 ntBASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC85AQ96PX6 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 AC110373.1-201ENST00000505994 3505 ntBASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 RNU6-483P-201ENST00000384088 108 ntBASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 HMGB1P20-201ENST00000402555 677 ntBASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 AL358934.1-201ENST00000432346 324 ntBASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 FCF1P1-201ENST00000432690 571 ntBASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 DNAJC19P5-201ENST00000443295 316 ntBASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 SDC4P-201ENST00000453285 601 ntBASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 RN7SL214P-201ENST00000487317 265 ntBASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 NIPA2P2-201ENST00000496376 1083 ntBASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 FGF7P4-201ENST00000509595 295 ntBASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 DEFB131D-201ENST00000526803 184 ntBASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 NRBF2P1-201ENST00000587407 859 ntBASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 AL161729.3-201ENST00000603533 673 ntBASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 MIR6768-201ENST00000610734 72 ntBASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 AC023509.5-201ENST00000617434 807 ntBASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 AC243756.2-201ENST00000618406 463 ntBASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CCDC85AQ96PX6 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
CCDC85AQ96PX6 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.4□□□□□ -1.23
CCDC85AQ96PX6 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
CCDC85AQ96PX6 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.39□□□□□ -1.23
CCDC85AQ96PX6 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC7.39□□□□□ -1.23
CCDC85AQ96PX6 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
CCDC85AQ96PX6 AL731532.1-201ENST00000623972 4236 ntBASIC7.39□□□□□ -1.23
CCDC85AQ96PX6 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CCDC85AQ96PX6 MIR375-201ENST00000362103 64 ntBASIC7.39□□□□□ -1.23
CCDC85AQ96PX6 Y_RNA.72-201ENST00000362894 103 ntBASIC7.39□□□□□ -1.23
CCDC85AQ96PX6 RNU6-582P-201ENST00000362989 107 ntBASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms