Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 AC103833.1-201ENST00000517442 172 ntBASIC4.68□□□□□ -1.66
NECTIN4Q96NY8 AC023632.4-201ENST00000517783 191 ntBASIC4.68□□□□□ -1.66
NECTIN4Q96NY8 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NECTIN4Q96NY8 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.68□□□□□ -1.66
NECTIN4Q96NY8 MIR4286-201ENST00000580651 93 ntBASIC4.68□□□□□ -1.66
NECTIN4Q96NY8 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.68□□□□□ -1.66
NECTIN4Q96NY8 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.68□□□□□ -1.66
NECTIN4Q96NY8 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.68□□□□□ -1.66
NECTIN4Q96NY8 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NECTIN4Q96NY8 AC135178.6-201ENST00000605314 398 ntBASIC4.68□□□□□ -1.66
NECTIN4Q96NY8 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.68□□□□□ -1.66
NECTIN4Q96NY8 AC024933.1-201ENST00000608472 348 ntBASIC4.68□□□□□ -1.66
NECTIN4Q96NY8 AL356863.1-201ENST00000623378 1080 ntBASIC4.68□□□□□ -1.66
NECTIN4Q96NY8 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.68□□□□□ -1.66
NECTIN4Q96NY8 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.68□□□□□ -1.66
NECTIN4Q96NY8 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
NECTIN4Q96NY8 AC106858.1-201ENST00000637497 429 ntBASIC4.68□□□□□ -1.66
NECTIN4Q96NY8 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.68□□□□□ -1.66
NECTIN4Q96NY8 VN2R3P-201ENST00000422626 1412 ntBASIC4.68□□□□□ -1.66
NECTIN4Q96NY8 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NECTIN4Q96NY8 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NECTIN4Q96NY8 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
NECTIN4Q96NY8 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NECTIN4Q96NY8 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NECTIN4Q96NY8 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
NECTIN4Q96NY8 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NECTIN4Q96NY8 MAPK10-286ENST00000641208 8747 ntBASIC4.68□□□□□ -1.66
NECTIN4Q96NY8 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.68□□□□□ -1.66
NECTIN4Q96NY8 AL391684.1-202ENST00000641293 1636 ntBASIC4.68□□□□□ -1.66
NECTIN4Q96NY8 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
NECTIN4Q96NY8 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
NECTIN4Q96NY8 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
NECTIN4Q96NY8 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 LARP1BP1-201ENST00000506036 1359 ntBASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 AC009501.3-201ENST00000605001 1352 ntBASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 CPHL1P-201ENST00000461341 3407 ntBASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 DDX18P3-201ENST00000404856 2007 ntBASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 AL353692.2-201ENST00000407054 335 ntBASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 SETP15-201ENST00000412724 337 ntBASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 AL450263.2-201ENST00000439400 589 ntBASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 VN1R34P-201ENST00000447387 883 ntBASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 RN7SL132P-201ENST00000478131 296 ntBASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 RPL35P6-201ENST00000490024 372 ntBASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 AC104629.1-201ENST00000494226 508 ntBASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 RNU6-1102P-201ENST00000516149 96 ntBASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 AC233702.9-201ENST00000581528 203 ntBASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 AL049844.2-201ENST00000604280 628 ntBASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 AC022106.2-201ENST00000620114 757 ntBASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 LINC01355-201ENST00000566551 5444 ntBASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NECTIN4Q96NY8 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
NECTIN4Q96NY8 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NECTIN4Q96NY8 LINC00622-201ENST00000562811 1570 ntBASIC4.66□□□□□ -1.66
NECTIN4Q96NY8 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
NECTIN4Q96NY8 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NECTIN4Q96NY8 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.66□□□□□ -1.66
NECTIN4Q96NY8 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.66□□□□□ -1.66
NECTIN4Q96NY8 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NECTIN4Q96NY8 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NECTIN4Q96NY8 MIR3065-201ENST00000390137 79 ntBASIC4.66□□□□□ -1.66
NECTIN4Q96NY8 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
NECTIN4Q96NY8 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.66□□□□□ -1.66
NECTIN4Q96NY8 AL359643.1-201ENST00000404109 423 ntBASIC4.66□□□□□ -1.66
NECTIN4Q96NY8 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.66□□□□□ -1.66
NECTIN4Q96NY8 OR6C64P-201ENST00000419708 825 ntBASIC4.66□□□□□ -1.66
NECTIN4Q96NY8 CYP4F29P-201ENST00000420685 446 ntBASIC4.66□□□□□ -1.66
NECTIN4Q96NY8 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.66□□□□□ -1.66
NECTIN4Q96NY8 RPL12P46-201ENST00000436610 195 ntBASIC4.66□□□□□ -1.66
NECTIN4Q96NY8 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.66□□□□□ -1.66
NECTIN4Q96NY8 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NECTIN4Q96NY8 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.66□□□□□ -1.66
NECTIN4Q96NY8 CCDC75P1-201ENST00000469247 791 ntBASIC4.66□□□□□ -1.66
NECTIN4Q96NY8 HMGB1P3-201ENST00000502802 616 ntBASIC4.66□□□□□ -1.66
NECTIN4Q96NY8 AC010627.1-201ENST00000503819 1294 ntBASIC4.66□□□□□ -1.66
NECTIN4Q96NY8 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.66□□□□□ -1.66
NECTIN4Q96NY8 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms