Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AP000843.1-201ENST00000624880 701 ntBASIC4.29□□□□□ -1.72
C9orf72Q96LT7 NOL8P1-201ENST00000508336 3529 ntBASIC4.29□□□□□ -1.72
C9orf72Q96LT7 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.29□□□□□ -1.72
C9orf72Q96LT7 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
C9orf72Q96LT7 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
C9orf72Q96LT7 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
C9orf72Q96LT7 AC018555.1-201ENST00000567548 1980 ntBASIC4.29□□□□□ -1.72
C9orf72Q96LT7 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
C9orf72Q96LT7 AC110792.3-201ENST00000595906 1614 ntBASIC4.28□□□□□ -1.72
C9orf72Q96LT7 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
C9orf72Q96LT7 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
C9orf72Q96LT7 RNA5SP502-201ENST00000362694 119 ntBASIC4.28□□□□□ -1.72
C9orf72Q96LT7 SNORA3C-201ENST00000408792 125 ntBASIC4.28□□□□□ -1.72
C9orf72Q96LT7 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.28□□□□□ -1.72
C9orf72Q96LT7 AC092647.1-201ENST00000420654 287 ntBASIC4.28□□□□□ -1.72
C9orf72Q96LT7 VDAC1P6-201ENST00000430062 855 ntBASIC4.28□□□□□ -1.72
C9orf72Q96LT7 AL132765.1-201ENST00000434165 553 ntBASIC4.28□□□□□ -1.72
C9orf72Q96LT7 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.28□□□□□ -1.72
C9orf72Q96LT7 RPL12P46-201ENST00000436610 195 ntBASIC4.28□□□□□ -1.72
C9orf72Q96LT7 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.28□□□□□ -1.72
C9orf72Q96LT7 RPL23AP52-201ENST00000439311 478 ntBASIC4.28□□□□□ -1.72
C9orf72Q96LT7 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.28□□□□□ -1.72
C9orf72Q96LT7 RAD23BP3-201ENST00000454157 1152 ntBASIC4.28□□□□□ -1.72
C9orf72Q96LT7 AL672167.3-201ENST00000465951 960 ntBASIC4.28□□□□□ -1.72
C9orf72Q96LT7 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.28□□□□□ -1.72
C9orf72Q96LT7 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.28□□□□□ -1.72
C9orf72Q96LT7 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.28□□□□□ -1.72
C9orf72Q96LT7 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.28□□□□□ -1.72
C9orf72Q96LT7 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
C9orf72Q96LT7 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
C9orf72Q96LT7 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.28□□□□□ -1.72
C9orf72Q96LT7 AC007599.1-201ENST00000568688 1174 ntBASIC4.28□□□□□ -1.72
C9orf72Q96LT7 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.28□□□□□ -1.72
C9orf72Q96LT7 AC069366.1-201ENST00000583159 838 ntBASIC4.28□□□□□ -1.72
C9orf72Q96LT7 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.28□□□□□ -1.72
C9orf72Q96LT7 AC068020.1-201ENST00000594215 661 ntBASIC4.28□□□□□ -1.72
C9orf72Q96LT7 AC092653.1-201ENST00000608509 531 ntBASIC4.28□□□□□ -1.72
C9orf72Q96LT7 AL445363.3-201ENST00000623080 671 ntBASIC4.28□□□□□ -1.72
C9orf72Q96LT7 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.28□□□□□ -1.72
C9orf72Q96LT7 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
C9orf72Q96LT7 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
C9orf72Q96LT7 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
C9orf72Q96LT7 IQCB2P-201ENST00000401788 1633 ntBASIC4.28□□□□□ -1.72
C9orf72Q96LT7 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
C9orf72Q96LT7 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
C9orf72Q96LT7 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
C9orf72Q96LT7 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.27□□□□□ -1.73
C9orf72Q96LT7 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
C9orf72Q96LT7 RN7SKP227-201ENST00000364445 330 ntBASIC4.27□□□□□ -1.73
C9orf72Q96LT7 MT-TP-201ENST00000387461 68 ntBASIC4.27□□□□□ -1.73
C9orf72Q96LT7 AL034403.1-201ENST00000399414 885 ntBASIC4.27□□□□□ -1.73
C9orf72Q96LT7 MIR1179-201ENST00000408703 91 ntBASIC4.27□□□□□ -1.73
C9orf72Q96LT7 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
C9orf72Q96LT7 AC004975.1-201ENST00000428733 208 ntBASIC4.27□□□□□ -1.73
C9orf72Q96LT7 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.27□□□□□ -1.73
C9orf72Q96LT7 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.27□□□□□ -1.73
C9orf72Q96LT7 YWHAEP5-201ENST00000431545 765 ntBASIC4.27□□□□□ -1.73
C9orf72Q96LT7 RPS3AP54-201ENST00000435535 734 ntBASIC4.27□□□□□ -1.73
C9orf72Q96LT7 RPS29P19-201ENST00000479709 171 ntBASIC4.27□□□□□ -1.73
C9orf72Q96LT7 AC010374.1-201ENST00000503762 1237 ntBASIC4.27□□□□□ -1.73
C9orf72Q96LT7 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.27□□□□□ -1.73
C9orf72Q96LT7 AC087888.1-201ENST00000550884 1254 ntBASIC4.27□□□□□ -1.73
C9orf72Q96LT7 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.27□□□□□ -1.73
C9orf72Q96LT7 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.27□□□□□ -1.73
C9orf72Q96LT7 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.27□□□□□ -1.73
C9orf72Q96LT7 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.27□□□□□ -1.73
C9orf72Q96LT7 AC011477.5-201ENST00000586571 259 ntBASIC4.27□□□□□ -1.73
C9orf72Q96LT7 IPO5P1-202ENST00000600039 287 ntBASIC4.27□□□□□ -1.73
C9orf72Q96LT7 AC113403.1-201ENST00000604910 193 ntBASIC4.27□□□□□ -1.73
C9orf72Q96LT7 ARF4P1-201ENST00000605447 541 ntBASIC4.27□□□□□ -1.73
C9orf72Q96LT7 AC025175.1-201ENST00000606482 759 ntBASIC4.27□□□□□ -1.73
C9orf72Q96LT7 uc_338.13-201ENST00000618243 179 ntBASIC4.27□□□□□ -1.73
C9orf72Q96LT7 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
C9orf72Q96LT7 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.27□□□□□ -1.73
C9orf72Q96LT7 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
C9orf72Q96LT7 EIF2AP4-201ENST00000424793 1781 ntBASIC4.27□□□□□ -1.73
C9orf72Q96LT7 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
C9orf72Q96LT7 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
C9orf72Q96LT7 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
C9orf72Q96LT7 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
C9orf72Q96LT7 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.26□□□□□ -1.73
C9orf72Q96LT7 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
C9orf72Q96LT7 MARK2P15-201ENST00000432204 2186 ntBASIC4.26□□□□□ -1.73
C9orf72Q96LT7 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.26□□□□□ -1.73
C9orf72Q96LT7 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
C9orf72Q96LT7 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
C9orf72Q96LT7 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
C9orf72Q96LT7 GCNT6-201ENST00000379591 934 ntBASIC4.26□□□□□ -1.73
C9orf72Q96LT7 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.26□□□□□ -1.73
C9orf72Q96LT7 SNORA11F-201ENST00000408237 128 ntBASIC4.26□□□□□ -1.73
C9orf72Q96LT7 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.26□□□□□ -1.73
C9orf72Q96LT7 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
C9orf72Q96LT7 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.26□□□□□ -1.73
C9orf72Q96LT7 AL157831.1-201ENST00000426134 473 ntBASIC4.26□□□□□ -1.73
C9orf72Q96LT7 AC093716.1-201ENST00000435923 377 ntBASIC4.26□□□□□ -1.73
C9orf72Q96LT7 TPTE2P3-201ENST00000441562 1189 ntBASIC4.26□□□□□ -1.73
C9orf72Q96LT7 EEF1A1P1-201ENST00000447052 739 ntBASIC4.26□□□□□ -1.73
C9orf72Q96LT7 NUTF2P3-201ENST00000448540 384 ntBASIC4.26□□□□□ -1.73
C9orf72Q96LT7 CLIC4P1-201ENST00000453177 535 ntBASIC4.26□□□□□ -1.73
C9orf72Q96LT7 RPL23AP81-201ENST00000455252 467 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms