Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC7.38□□□□□ -1.23
TRIM47Q96LD4 CA1-215ENST00000522389 551 ntTSL 3 BASIC7.38□□□□□ -1.23
TRIM47Q96LD4 AC023245.2-201ENST00000530760 2978 ntBASIC7.38□□□□□ -1.23
TRIM47Q96LD4 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC7.38□□□□□ -1.23
TRIM47Q96LD4 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC7.38□□□□□ -1.23
TRIM47Q96LD4 SNRPGP18-201ENST00000553000 214 ntBASIC7.38□□□□□ -1.23
TRIM47Q96LD4 SCOCP1-201ENST00000554676 349 ntBASIC7.38□□□□□ -1.23
TRIM47Q96LD4 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC7.38□□□□□ -1.23
TRIM47Q96LD4 TPRX1P1-201ENST00000557620 319 ntBASIC7.38□□□□□ -1.23
TRIM47Q96LD4 AC068714.1-201ENST00000559623 800 ntBASIC7.38□□□□□ -1.23
TRIM47Q96LD4 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC7.38□□□□□ -1.23
TRIM47Q96LD4 AC106785.4-201ENST00000569492 412 ntBASIC7.38□□□□□ -1.23
TRIM47Q96LD4 AP000654.2-201ENST00000605633 586 ntBASIC7.38□□□□□ -1.23
TRIM47Q96LD4 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC7.38□□□□□ -1.23
TRIM47Q96LD4 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC7.38□□□□□ -1.23
TRIM47Q96LD4 AC068722.2-201ENST00000618734 544 ntBASIC7.38□□□□□ -1.23
TRIM47Q96LD4 AC110994.2-201ENST00000635481 492 ntBASIC7.38□□□□□ -1.23
TRIM47Q96LD4 MTHFD1P1-201ENST00000413059 2764 ntBASIC7.38□□□□□ -1.23
TRIM47Q96LD4 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TRIM47Q96LD4 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
TRIM47Q96LD4 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TRIM47Q96LD4 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.38□□□□□ -1.23
TRIM47Q96LD4 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC7.38□□□□□ -1.23
TRIM47Q96LD4 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.38□□□□□ -1.23
TRIM47Q96LD4 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TRIM47Q96LD4 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.38□□□□□ -1.23
TRIM47Q96LD4 AC079298.1-201ENST00000625026 1619 ntBASIC7.38□□□□□ -1.23
TRIM47Q96LD4 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM47Q96LD4 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM47Q96LD4 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
TRIM47Q96LD4 AC241584.2-201ENST00000637142 2090 ntBASIC7.37□□□□□ -1.23
TRIM47Q96LD4 CYP1D1P-201ENST00000416662 1433 ntBASIC7.37□□□□□ -1.23
TRIM47Q96LD4 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM47Q96LD4 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM47Q96LD4 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.37□□□□□ -1.23
TRIM47Q96LD4 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.37□□□□□ -1.23
TRIM47Q96LD4 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.37□□□□□ -1.23
TRIM47Q96LD4 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
TRIM47Q96LD4 RNA5SP273-201ENST00000362484 113 ntBASIC7.37□□□□□ -1.23
TRIM47Q96LD4 RNU6-697P-201ENST00000363348 107 ntBASIC7.37□□□□□ -1.23
TRIM47Q96LD4 RNU6-74P-201ENST00000384235 107 ntBASIC7.37□□□□□ -1.23
TRIM47Q96LD4 Y_RNA.557-201ENST00000384680 107 ntBASIC7.37□□□□□ -1.23
TRIM47Q96LD4 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
TRIM47Q96LD4 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC7.37□□□□□ -1.23
TRIM47Q96LD4 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC7.37□□□□□ -1.23
TRIM47Q96LD4 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC7.37□□□□□ -1.23
TRIM47Q96LD4 HMGB1P16-201ENST00000447155 540 ntBASIC7.37□□□□□ -1.23
TRIM47Q96LD4 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.37□□□□□ -1.23
TRIM47Q96LD4 C1DP4-201ENST00000455429 424 ntBASIC7.37□□□□□ -1.23
TRIM47Q96LD4 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC7.37□□□□□ -1.23
TRIM47Q96LD4 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC7.37□□□□□ -1.23
TRIM47Q96LD4 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC7.37□□□□□ -1.23
TRIM47Q96LD4 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC7.37□□□□□ -1.23
TRIM47Q96LD4 Y_RNA.718-201ENST00000517110 102 ntBASIC7.37□□□□□ -1.23
TRIM47Q96LD4 AC027667.1-201ENST00000545814 304 ntBASIC7.37□□□□□ -1.23
TRIM47Q96LD4 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM47Q96LD4 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.37□□□□□ -1.23
TRIM47Q96LD4 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC7.37□□□□□ -1.23
TRIM47Q96LD4 MIR5697-201ENST00000578045 78 ntBASIC7.37□□□□□ -1.23
TRIM47Q96LD4 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.37□□□□□ -1.23
TRIM47Q96LD4 AC004696.1-201ENST00000614345 607 ntBASIC7.37□□□□□ -1.23
TRIM47Q96LD4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC7.37□□□□□ -1.23
TRIM47Q96LD4 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM47Q96LD4 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM47Q96LD4 AP002833.3-201ENST00000625075 2265 ntBASIC7.37□□□□□ -1.23
TRIM47Q96LD4 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
TRIM47Q96LD4 MTND5P30-201ENST00000452896 1731 ntBASIC7.37□□□□□ -1.23
TRIM47Q96LD4 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
TRIM47Q96LD4 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
TRIM47Q96LD4 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.37□□□□□ -1.23
TRIM47Q96LD4 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.37□□□□□ -1.23
TRIM47Q96LD4 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.37□□□□□ -1.23
TRIM47Q96LD4 AC006213.6-201ENST00000623722 4179 ntBASIC7.37□□□□□ -1.23
TRIM47Q96LD4 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.37□□□□□ -1.23
TRIM47Q96LD4 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
TRIM47Q96LD4 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
TRIM47Q96LD4 GDI2P1-201ENST00000429312 1336 ntBASIC7.36□□□□□ -1.23
TRIM47Q96LD4 CASC19-228ENST00000641414 1684 ntBASIC7.36□□□□□ -1.23
TRIM47Q96LD4 AC005294.1-201ENST00000355509 281 ntBASIC7.36□□□□□ -1.23
TRIM47Q96LD4 Y_RNA.176-201ENST00000363815 109 ntBASIC7.36□□□□□ -1.23
TRIM47Q96LD4 RNU6-1322P-201ENST00000364309 107 ntBASIC7.36□□□□□ -1.23
TRIM47Q96LD4 RNU6-359P-201ENST00000365466 108 ntBASIC7.36□□□□□ -1.23
TRIM47Q96LD4 SNORA32.2-201ENST00000384049 122 ntBASIC7.36□□□□□ -1.23
TRIM47Q96LD4 SNORD116-29-201ENST00000384516 83 ntBASIC7.36□□□□□ -1.23
TRIM47Q96LD4 AL592114.1-201ENST00000403842 483 ntBASIC7.36□□□□□ -1.23
TRIM47Q96LD4 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC7.36□□□□□ -1.23
TRIM47Q96LD4 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC7.36□□□□□ -1.23
TRIM47Q96LD4 PGBD4P3-201ENST00000440731 581 ntBASIC7.36□□□□□ -1.23
TRIM47Q96LD4 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC7.36□□□□□ -1.23
TRIM47Q96LD4 RAB28P3-201ENST00000448325 597 ntBASIC7.36□□□□□ -1.23
TRIM47Q96LD4 MEMO1P4-201ENST00000453590 386 ntBASIC7.36□□□□□ -1.23
TRIM47Q96LD4 HIGD1AP8-201ENST00000453927 274 ntBASIC7.36□□□□□ -1.23
TRIM47Q96LD4 AC239798.3-201ENST00000454459 408 ntBASIC7.36□□□□□ -1.23
TRIM47Q96LD4 AL133351.3-201ENST00000454998 193 ntBASIC7.36□□□□□ -1.23
TRIM47Q96LD4 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC7.36□□□□□ -1.23
TRIM47Q96LD4 RN7SL717P-201ENST00000478343 297 ntBASIC7.36□□□□□ -1.23
TRIM47Q96LD4 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC7.36□□□□□ -1.23
TRIM47Q96LD4 AC083906.1-201ENST00000509298 406 ntBASIC7.36□□□□□ -1.23
TRIM47Q96LD4 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC7.36□□□□□ -1.23
TRIM47Q96LD4 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms