Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 AC092809.1-201ENST00000441469 474 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 AL354714.3-201ENST00000447284 493 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 MTND1P31-201ENST00000449206 961 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 TCEA1P1-201ENST00000449716 880 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 MRPS33P2-201ENST00000507850 322 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 AC118282.2-201ENST00000508739 374 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 OR7H2P-201ENST00000513483 306 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 AC009097.3-201ENST00000563557 1018 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 AC023813.2-201ENST00000564321 469 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 MIR4480-201ENST00000582492 71 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 AC011447.4-201ENST00000587562 111 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 VN1R83P-201ENST00000595685 445 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 AC016877.3-201ENST00000606778 504 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 AP005432.2-201ENST00000608162 586 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 FAM25E-202ENST00000608562 189 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 AC021755.4-201ENST00000616620 456 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 AL355493.4-201ENST00000618530 292 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 AC116563.2-201ENST00000624751 535 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 AC087821.2-201ENST00000637086 450 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 THAP12P4-201ENST00000528321 2266 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 BX005019.1-201ENST00000561881 1810 ntBASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CHMP4CQ96CF2 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 CASC19-206ENST00000641028 1430 ntBASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 RNU6-1242P-201ENST00000391052 103 ntBASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 GSTM3P2-201ENST00000412746 530 ntBASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 CHEK2P3-201ENST00000416118 248 ntBASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 RPS24P7-201ENST00000416921 246 ntBASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 AL356320.2-201ENST00000417263 507 ntBASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 AC234782.4-201ENST00000417646 1048 ntBASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 DYNLL1P7-201ENST00000429273 258 ntBASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 PTENP1-201ENST00000447117 1215 ntBASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 NPM1P39-201ENST00000449818 867 ntBASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 RPS4XP12-201ENST00000461747 709 ntBASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 RPS3AP41-201ENST00000462701 778 ntBASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 MTCO2P6-201ENST00000463134 685 ntBASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 AC011037.1-201ENST00000483964 558 ntBASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 AC113347.3-201ENST00000509113 148 ntBASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 RFPL4AP5-201ENST00000514977 504 ntBASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 RNU6-416P-201ENST00000516265 103 ntBASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 Y_RNA.719-201ENST00000517156 106 ntBASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 RN7SKP283-201ENST00000517197 270 ntBASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 MTND2P38-201ENST00000522536 667 ntBASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 AP001922.4-201ENST00000526967 290 ntBASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 MEMO1P5-201ENST00000604810 406 ntBASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 AC025588.2-201ENST00000604851 466 ntBASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 AL392112.1-201ENST00000605115 829 ntBASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 Z99289.3-201ENST00000605586 594 ntBASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 AL592148.2-201ENST00000612210 372 ntBASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 AC018926.3-201ENST00000618841 406 ntBASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 AC087385.3-201ENST00000620477 187 ntBASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 AC091905.4-201ENST00000623432 202 ntBASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 AL731532.2-201ENST00000623542 1953 ntBASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CHMP4CQ96CF2 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms