Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.53□□□□□ -1.69
VPS33AQ96AX1 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS33AQ96AX1 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.52□□□□□ -1.69
VPS33AQ96AX1 AL136164.3-201ENST00000624429 3978 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 AC011978.2-201ENST00000569835 2054 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
VPS33AQ96AX1 RNU1-20P-201ENST00000363314 162 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 AC234772.1-201ENST00000377927 937 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 RNU6-1293P-201ENST00000384077 107 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
VPS33AQ96AX1 MIR921-201ENST00000401133 56 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 AL391361.1-201ENST00000405580 489 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 HDGFP1-201ENST00000405943 252 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 RNU6-272P-201ENST00000411028 104 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS33AQ96AX1 GJA6P-201ENST00000415117 1042 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 NUP35P2-201ENST00000416748 943 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 LINC00993-201ENST00000420453 540 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 Z74021.1-201ENST00000423610 407 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 AL645608.4-201ENST00000423619 154 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS33AQ96AX1 AC115285.1-201ENST00000424879 736 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 AC013262.1-201ENST00000426710 252 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 AC008065.1-201ENST00000428525 348 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.52□□□□□ -1.69
VPS33AQ96AX1 PRPF38AP2-201ENST00000438179 851 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 CNOT7P2-201ENST00000441051 832 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 AC004865.1-201ENST00000442276 1003 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 AURKAPS1-201ENST00000451805 1212 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.52□□□□□ -1.69
VPS33AQ96AX1 FGF7P3-201ENST00000454645 303 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 RN7SL172P-201ENST00000460535 303 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.52□□□□□ -1.69
VPS33AQ96AX1 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.52□□□□□ -1.69
VPS33AQ96AX1 RN7SL214P-201ENST00000487317 265 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 RPS27P23-201ENST00000487608 251 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 NDUFB4P12-201ENST00000513465 390 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 AF279873.1-201ENST00000523393 313 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 OR5M2P-201ENST00000529003 936 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.52□□□□□ -1.69
VPS33AQ96AX1 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS33AQ96AX1 AC087894.1-201ENST00000538359 518 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS33AQ96AX1 AC010735.1-201ENST00000567305 1026 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS33AQ96AX1 AC126365.2-201ENST00000580630 379 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
VPS33AQ96AX1 AC011453.2-201ENST00000603737 729 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 AC010680.4-201ENST00000605334 543 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 AC026979.4-201ENST00000606555 645 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 AC093799.2-201ENST00000610062 578 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 AL353726.1-201ENST00000614041 1000 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
VPS33AQ96AX1 RNU6-156P-201ENST00000621869 107 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 AL138955.1-201ENST00000622881 1040 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS33AQ96AX1 AC055839.1-201ENST00000634467 498 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 AL590396.4-201ENST00000636779 956 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 AC006927.2-201ENST00000639256 389 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.52□□□□□ -1.69
VPS33AQ96AX1 MFSD8-220ENST00000641243 1422 ntBASIC4.52□□□□□ -1.69
VPS33AQ96AX1 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
VPS33AQ96AX1 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 ZNF33CP-201ENST00000432492 2030 ntBASIC4.51□□□□□ -1.69
VPS33AQ96AX1 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.51□□□□□ -1.69
VPS33AQ96AX1 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 HSPD1P14-201ENST00000432666 1618 ntBASIC4.51□□□□□ -1.69
VPS33AQ96AX1 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 OR56B2P-201ENST00000317102 954 ntBASIC4.51□□□□□ -1.69
VPS33AQ96AX1 RPL23P2-201ENST00000320371 421 ntBASIC4.51□□□□□ -1.69
VPS33AQ96AX1 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 RNU1-106P-201ENST00000384382 164 ntBASIC4.51□□□□□ -1.69
VPS33AQ96AX1 RNU6-549P-201ENST00000384433 107 ntBASIC4.51□□□□□ -1.69
VPS33AQ96AX1 RNU6-1151P-201ENST00000384684 107 ntBASIC4.51□□□□□ -1.69
VPS33AQ96AX1 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 AL024507.1-201ENST00000412741 274 ntBASIC4.51□□□□□ -1.69
VPS33AQ96AX1 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 AL009174.1-201ENST00000426577 416 ntBASIC4.51□□□□□ -1.69
VPS33AQ96AX1 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 HMGB1P45-201ENST00000435986 653 ntBASIC4.51□□□□□ -1.69
VPS33AQ96AX1 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 RPL7P11-201ENST00000437586 658 ntBASIC4.51□□□□□ -1.69
VPS33AQ96AX1 RPL23AP15-201ENST00000450202 459 ntBASIC4.51□□□□□ -1.69
VPS33AQ96AX1 AL162388.1-201ENST00000450912 352 ntBASIC4.51□□□□□ -1.69
VPS33AQ96AX1 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
VPS33AQ96AX1 AC026348.1-201ENST00000462549 1053 ntBASIC4.51□□□□□ -1.69
VPS33AQ96AX1 AC108022.1-201ENST00000493466 478 ntBASIC4.51□□□□□ -1.69
VPS33AQ96AX1 AC026414.1-201ENST00000504046 698 ntBASIC4.51□□□□□ -1.69
VPS33AQ96AX1 HIGD1AP14-201ENST00000507617 282 ntBASIC4.51□□□□□ -1.69
VPS33AQ96AX1 AC112206.4-201ENST00000515142 405 ntBASIC4.51□□□□□ -1.69
VPS33AQ96AX1 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms