Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
ATP2A3Q93084 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
ATP2A3Q93084 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
ATP2A3Q93084 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.17□□□□□ -1.58
ATP2A3Q93084 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ATP2A3Q93084 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.17□□□□□ -1.58
ATP2A3Q93084 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ATP2A3Q93084 AC099654.2-201ENST00000433031 1980 ntBASIC5.16□□□□□ -1.58
ATP2A3Q93084 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ATP2A3Q93084 VN2R3P-201ENST00000422626 1412 ntBASIC5.16□□□□□ -1.58
ATP2A3Q93084 AL451142.2-201ENST00000429076 2090 ntBASIC5.16□□□□□ -1.58
ATP2A3Q93084 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
ATP2A3Q93084 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
ATP2A3Q93084 RNU4-44P-201ENST00000363050 141 ntBASIC5.16□□□□□ -1.58
ATP2A3Q93084 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.16□□□□□ -1.58
ATP2A3Q93084 AP000357.1-201ENST00000409926 1165 ntBASIC5.16□□□□□ -1.58
ATP2A3Q93084 RNA5SP113-201ENST00000410486 84 ntBASIC5.16□□□□□ -1.58
ATP2A3Q93084 AC016397.1-201ENST00000412463 242 ntBASIC5.16□□□□□ -1.58
ATP2A3Q93084 HMGB3P31-201ENST00000413333 595 ntBASIC5.16□□□□□ -1.58
ATP2A3Q93084 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.16□□□□□ -1.58
ATP2A3Q93084 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.16□□□□□ -1.58
ATP2A3Q93084 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.16□□□□□ -1.58
ATP2A3Q93084 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.16□□□□□ -1.58
ATP2A3Q93084 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ATP2A3Q93084 RPL12P34-201ENST00000424532 479 ntBASIC5.16□□□□□ -1.58
ATP2A3Q93084 RPS29P9-201ENST00000440360 171 ntBASIC5.16□□□□□ -1.58
ATP2A3Q93084 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.16□□□□□ -1.58
ATP2A3Q93084 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
ATP2A3Q93084 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.16□□□□□ -1.58
ATP2A3Q93084 SLC25A18P1-201ENST00000449385 454 ntBASIC5.16□□□□□ -1.58
ATP2A3Q93084 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.16□□□□□ -1.58
ATP2A3Q93084 AC093166.2-201ENST00000455969 1017 ntBASIC5.16□□□□□ -1.58
ATP2A3Q93084 MTND6P6-201ENST00000478031 263 ntBASIC5.16□□□□□ -1.58
ATP2A3Q93084 AC079203.1-201ENST00000487972 404 ntBASIC5.16□□□□□ -1.58
ATP2A3Q93084 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.16□□□□□ -1.58
ATP2A3Q93084 MRPS33P2-201ENST00000507850 322 ntBASIC5.16□□□□□ -1.58
ATP2A3Q93084 AC113420.1-201ENST00000507903 571 ntBASIC5.16□□□□□ -1.58
ATP2A3Q93084 HMGB3P16-201ENST00000508037 287 ntBASIC5.16□□□□□ -1.58
ATP2A3Q93084 RNA5SP303-201ENST00000516192 130 ntBASIC5.16□□□□□ -1.58
ATP2A3Q93084 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.16□□□□□ -1.58
ATP2A3Q93084 POLR2KP1-201ENST00000553226 168 ntBASIC5.16□□□□□ -1.58
ATP2A3Q93084 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.16□□□□□ -1.58
ATP2A3Q93084 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.16□□□□□ -1.58
ATP2A3Q93084 RN7SL435P-201ENST00000584418 282 ntBASIC5.16□□□□□ -1.58
ATP2A3Q93084 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.16□□□□□ -1.58
ATP2A3Q93084 AL512782.1-201ENST00000603093 364 ntBASIC5.16□□□□□ -1.58
ATP2A3Q93084 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.16□□□□□ -1.58
ATP2A3Q93084 AL391358.1-201ENST00000605342 190 ntBASIC5.16□□□□□ -1.58
ATP2A3Q93084 AL355816.1-201ENST00000607951 118 ntBASIC5.16□□□□□ -1.58
ATP2A3Q93084 AC015914.2-201ENST00000618167 288 ntBASIC5.16□□□□□ -1.58
ATP2A3Q93084 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ATP2A3Q93084 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.16□□□□□ -1.58
ATP2A3Q93084 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.16□□□□□ -1.58
ATP2A3Q93084 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.16□□□□□ -1.58
ATP2A3Q93084 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.16□□□□□ -1.58
ATP2A3Q93084 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.16□□□□□ -1.58
ATP2A3Q93084 AC114546.3-201ENST00000623582 1734 ntBASIC5.16□□□□□ -1.58
ATP2A3Q93084 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
ATP2A3Q93084 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.16□□□□□ -1.58
ATP2A3Q93084 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
ATP2A3Q93084 AL355578.1-201ENST00000607405 1328 ntBASIC5.16□□□□□ -1.58
ATP2A3Q93084 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.16□□□□□ -1.58
ATP2A3Q93084 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ATP2A3Q93084 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
ATP2A3Q93084 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
ATP2A3Q93084 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
ATP2A3Q93084 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
ATP2A3Q93084 MFSD8-220ENST00000641243 1422 ntBASIC5.15□□□□□ -1.58
ATP2A3Q93084 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
ATP2A3Q93084 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
ATP2A3Q93084 SCN1A-220ENST00000641603 12506 ntBASIC5.15□□□□□ -1.58
ATP2A3Q93084 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
ATP2A3Q93084 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
ATP2A3Q93084 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
ATP2A3Q93084 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.15□□□□□ -1.58
ATP2A3Q93084 PHKBP1-201ENST00000450951 1951 ntBASIC5.15□□□□□ -1.58
ATP2A3Q93084 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
ATP2A3Q93084 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ATP2A3Q93084 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
ATP2A3Q93084 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
ATP2A3Q93084 RPS16P5-201ENST00000406501 404 ntBASIC5.15□□□□□ -1.59
ATP2A3Q93084 AC092638.1-201ENST00000411966 1275 ntBASIC5.15□□□□□ -1.59
ATP2A3Q93084 GSTM3P2-201ENST00000412746 530 ntBASIC5.15□□□□□ -1.59
ATP2A3Q93084 MTND4P3-201ENST00000417829 541 ntBASIC5.15□□□□□ -1.59
ATP2A3Q93084 MTND2P16-201ENST00000419987 799 ntBASIC5.15□□□□□ -1.59
ATP2A3Q93084 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.15□□□□□ -1.59
ATP2A3Q93084 GTF2IP3-201ENST00000433887 494 ntBASIC5.15□□□□□ -1.59
ATP2A3Q93084 AC093414.1-201ENST00000434712 514 ntBASIC5.15□□□□□ -1.59
ATP2A3Q93084 FTH1P16-201ENST00000435241 552 ntBASIC5.15□□□□□ -1.59
ATP2A3Q93084 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ATP2A3Q93084 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.15□□□□□ -1.59
ATP2A3Q93084 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.15□□□□□ -1.59
ATP2A3Q93084 TPTE2P6-202ENST00000445572 1007 ntBASIC5.15□□□□□ -1.59
ATP2A3Q93084 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.15□□□□□ -1.59
ATP2A3Q93084 OR1H1P-201ENST00000448731 937 ntBASIC5.15□□□□□ -1.59
ATP2A3Q93084 OR51B8P-201ENST00000449892 769 ntBASIC5.15□□□□□ -1.59
ATP2A3Q93084 AL513533.1-201ENST00000453728 415 ntBASIC5.15□□□□□ -1.59
ATP2A3Q93084 AL035407.2-201ENST00000454090 378 ntBASIC5.15□□□□□ -1.59
ATP2A3Q93084 AC006967.1-201ENST00000467608 589 ntBASIC5.15□□□□□ -1.59
ATP2A3Q93084 AC008897.1-201ENST00000494006 347 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms