Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL356806.1-201ENST00000422524 916 ntBASIC4.99□□□□□ -1.61
SNED1Q8TER0 MTCYBP32-201ENST00000427945 1084 ntBASIC4.99□□□□□ -1.61
SNED1Q8TER0 OR4F13P-201ENST00000428478 931 ntBASIC4.99□□□□□ -1.61
SNED1Q8TER0 AL358472.1-201ENST00000431295 329 ntBASIC4.99□□□□□ -1.61
SNED1Q8TER0 AL500527.1-201ENST00000448532 255 ntBASIC4.99□□□□□ -1.61
SNED1Q8TER0 MTND2P3-201ENST00000452458 470 ntBASIC4.99□□□□□ -1.61
SNED1Q8TER0 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.99□□□□□ -1.61
SNED1Q8TER0 AC239798.3-201ENST00000454459 408 ntBASIC4.99□□□□□ -1.61
SNED1Q8TER0 SEPT7P3-201ENST00000455017 621 ntBASIC4.99□□□□□ -1.61
SNED1Q8TER0 AC016687.1-201ENST00000482574 353 ntBASIC4.99□□□□□ -1.61
SNED1Q8TER0 MTND3P6-201ENST00000485242 339 ntBASIC4.99□□□□□ -1.61
SNED1Q8TER0 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.99□□□□□ -1.61
SNED1Q8TER0 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.99□□□□□ -1.61
SNED1Q8TER0 RN7SKP46-201ENST00000515942 234 ntBASIC4.99□□□□□ -1.61
SNED1Q8TER0 RNU1-95P-201ENST00000516357 160 ntBASIC4.99□□□□□ -1.61
SNED1Q8TER0 RNU1-128P-201ENST00000516704 160 ntBASIC4.99□□□□□ -1.61
SNED1Q8TER0 MTND2P17-201ENST00000550281 688 ntBASIC4.99□□□□□ -1.61
SNED1Q8TER0 EIF1AXP2-201ENST00000555940 413 ntBASIC4.99□□□□□ -1.61
SNED1Q8TER0 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.99□□□□□ -1.61
SNED1Q8TER0 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.99□□□□□ -1.61
SNED1Q8TER0 AL139022.2-201ENST00000606934 443 ntBASIC4.99□□□□□ -1.61
SNED1Q8TER0 AC253576.2-201ENST00000618815 580 ntBASIC4.99□□□□□ -1.61
SNED1Q8TER0 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.99□□□□□ -1.61
SNED1Q8TER0 AL163152.1-201ENST00000642001 374 ntBASIC4.99□□□□□ -1.61
SNED1Q8TER0 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SNED1Q8TER0 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.99□□□□□ -1.61
SNED1Q8TER0 AL049781.1-201ENST00000623195 3585 ntBASIC4.99□□□□□ -1.61
SNED1Q8TER0 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SNED1Q8TER0 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.98□□□□□ -1.61
SNED1Q8TER0 AC083799.1-201ENST00000366451 910 ntBASIC4.98□□□□□ -1.61
SNED1Q8TER0 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
SNED1Q8TER0 ATP5F1P4-201ENST00000397288 746 ntBASIC4.98□□□□□ -1.61
SNED1Q8TER0 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.98□□□□□ -1.61
SNED1Q8TER0 AC004448.2-201ENST00000422360 586 ntBASIC4.98□□□□□ -1.61
SNED1Q8TER0 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.98□□□□□ -1.61
SNED1Q8TER0 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.98□□□□□ -1.61
SNED1Q8TER0 OR7L1P-201ENST00000456181 380 ntBASIC4.98□□□□□ -1.61
SNED1Q8TER0 RPL36AP13-201ENST00000457490 317 ntBASIC4.98□□□□□ -1.61
SNED1Q8TER0 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.98□□□□□ -1.61
SNED1Q8TER0 RPL7P49-201ENST00000471402 708 ntBASIC4.98□□□□□ -1.61
SNED1Q8TER0 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.98□□□□□ -1.61
SNED1Q8TER0 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
SNED1Q8TER0 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SNED1Q8TER0 AL139099.1-201ENST00000497398 403 ntBASIC4.98□□□□□ -1.61
SNED1Q8TER0 HAUS1P1-201ENST00000505275 832 ntBASIC4.98□□□□□ -1.61
SNED1Q8TER0 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.98□□□□□ -1.61
SNED1Q8TER0 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.98□□□□□ -1.61
SNED1Q8TER0 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.98□□□□□ -1.61
SNED1Q8TER0 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.98□□□□□ -1.61
SNED1Q8TER0 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SNED1Q8TER0 AC067805.1-201ENST00000559344 470 ntBASIC4.98□□□□□ -1.61
SNED1Q8TER0 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.98□□□□□ -1.61
SNED1Q8TER0 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.98□□□□□ -1.61
SNED1Q8TER0 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.98□□□□□ -1.61
SNED1Q8TER0 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.98□□□□□ -1.61
SNED1Q8TER0 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SNED1Q8TER0 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.98□□□□□ -1.61
SNED1Q8TER0 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SNED1Q8TER0 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SNED1Q8TER0 AC084757.4-201ENST00000616350 526 ntBASIC4.98□□□□□ -1.61
SNED1Q8TER0 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SNED1Q8TER0 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SNED1Q8TER0 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SNED1Q8TER0 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SNED1Q8TER0 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SNED1Q8TER0 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.98□□□□□ -1.61
SNED1Q8TER0 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SNED1Q8TER0 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.97□□□□□ -1.61
SNED1Q8TER0 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.97□□□□□ -1.61
SNED1Q8TER0 OR5BE1P-201ENST00000425977 939 ntBASIC4.97□□□□□ -1.61
SNED1Q8TER0 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.97□□□□□ -1.61
SNED1Q8TER0 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.97□□□□□ -1.61
SNED1Q8TER0 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.97□□□□□ -1.61
SNED1Q8TER0 MTND3P4-201ENST00000453537 303 ntBASIC4.97□□□□□ -1.61
SNED1Q8TER0 AC007967.1-201ENST00000455422 1159 ntBASIC4.97□□□□□ -1.61
SNED1Q8TER0 TPRKBP1-201ENST00000456243 481 ntBASIC4.97□□□□□ -1.61
SNED1Q8TER0 AC108022.1-201ENST00000493466 478 ntBASIC4.97□□□□□ -1.61
SNED1Q8TER0 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.97□□□□□ -1.61
SNED1Q8TER0 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.97□□□□□ -1.61
SNED1Q8TER0 AC093853.1-201ENST00000515689 483 ntBASIC4.97□□□□□ -1.61
SNED1Q8TER0 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.97□□□□□ -1.61
SNED1Q8TER0 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.97□□□□□ -1.61
SNED1Q8TER0 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.97□□□□□ -1.61
SNED1Q8TER0 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.97□□□□□ -1.61
SNED1Q8TER0 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.97□□□□□ -1.61
SNED1Q8TER0 AC234775.3-201ENST00000564612 656 ntBASIC4.97□□□□□ -1.61
SNED1Q8TER0 AC005412.1-201ENST00000580812 1049 ntBASIC4.97□□□□□ -1.61
SNED1Q8TER0 MIR4760-201ENST00000585040 80 ntBASIC4.97□□□□□ -1.61
SNED1Q8TER0 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.97□□□□□ -1.61
SNED1Q8TER0 AC005255.1-201ENST00000593748 216 ntBASIC4.97□□□□□ -1.61
SNED1Q8TER0 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.97□□□□□ -1.61
SNED1Q8TER0 SRGNP1-201ENST00000603392 451 ntBASIC4.97□□□□□ -1.61
SNED1Q8TER0 U6.105-201ENST00000637379 88 ntBASIC4.97□□□□□ -1.61
SNED1Q8TER0 OR5BE1P-202ENST00000641168 1176 ntBASIC4.97□□□□□ -1.61
SNED1Q8TER0 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SNED1Q8TER0 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SNED1Q8TER0 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
SNED1Q8TER0 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
SNED1Q8TER0 MUC2-202ENST00000613187 4845 ntBASIC4.97□□□□□ -1.61
SNED1Q8TER0 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms