Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC079880.2-201ENST00000603790 1213 ntBASIC5.87□□□□□ -1.47
SYNE4Q8N205 AC121247.2-201ENST00000604776 136 ntBASIC5.87□□□□□ -1.47
SYNE4Q8N205 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.87□□□□□ -1.47
SYNE4Q8N205 AC073137.1-201ENST00000605636 634 ntBASIC5.87□□□□□ -1.47
SYNE4Q8N205 AL583856.2-201ENST00000606298 543 ntBASIC5.87□□□□□ -1.47
SYNE4Q8N205 PART1_2.1-201ENST00000612397 250 ntBASIC5.87□□□□□ -1.47
SYNE4Q8N205 HULC.1-201ENST00000612720 240 ntBASIC5.87□□□□□ -1.47
SYNE4Q8N205 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.87□□□□□ -1.47
SYNE4Q8N205 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
SYNE4Q8N205 SAMMSON-210ENST00000641260 1308 ntBASIC5.87□□□□□ -1.47
SYNE4Q8N205 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE4Q8N205 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.87□□□□□ -1.47
SYNE4Q8N205 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SYNE4Q8N205 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.87□□□□□ -1.47
SYNE4Q8N205 OR14L1P-202ENST00000641545 3009 ntBASIC5.86□□□□□ -1.47
SYNE4Q8N205 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.86□□□□□ -1.47
SYNE4Q8N205 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SYNE4Q8N205 AP002512.4-202ENST00000641599 4530 ntBASIC5.86□□□□□ -1.47
SYNE4Q8N205 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE4Q8N205 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE4Q8N205 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE4Q8N205 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.86□□□□□ -1.47
SYNE4Q8N205 OR6C69P-201ENST00000394268 893 ntBASIC5.86□□□□□ -1.47
SYNE4Q8N205 AP002784.2-201ENST00000397300 549 ntBASIC5.86□□□□□ -1.47
SYNE4Q8N205 SNORA11C-201ENST00000408532 129 ntBASIC5.86□□□□□ -1.47
SYNE4Q8N205 Y_RNA.619-201ENST00000410951 90 ntBASIC5.86□□□□□ -1.47
SYNE4Q8N205 AC079809.1-201ENST00000415468 276 ntBASIC5.86□□□□□ -1.47
SYNE4Q8N205 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.86□□□□□ -1.47
SYNE4Q8N205 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.86□□□□□ -1.47
SYNE4Q8N205 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.86□□□□□ -1.47
SYNE4Q8N205 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.86□□□□□ -1.47
SYNE4Q8N205 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.86□□□□□ -1.47
SYNE4Q8N205 DLGAP5P1-201ENST00000430307 464 ntBASIC5.86□□□□□ -1.47
SYNE4Q8N205 AL365396.1-201ENST00000430854 671 ntBASIC5.86□□□□□ -1.47
SYNE4Q8N205 AC005345.1-201ENST00000431868 217 ntBASIC5.86□□□□□ -1.47
SYNE4Q8N205 AC092162.1-201ENST00000432828 434 ntBASIC5.86□□□□□ -1.47
SYNE4Q8N205 YWHAZP2-201ENST00000440317 728 ntBASIC5.86□□□□□ -1.47
SYNE4Q8N205 AC118469.1-201ENST00000442943 488 ntBASIC5.86□□□□□ -1.47
SYNE4Q8N205 MTND6P5-201ENST00000448266 512 ntBASIC5.86□□□□□ -1.47
SYNE4Q8N205 RPL7AP52-201ENST00000458096 790 ntBASIC5.86□□□□□ -1.47
SYNE4Q8N205 AC245028.2-201ENST00000458673 253 ntBASIC5.86□□□□□ -1.47
SYNE4Q8N205 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE4Q8N205 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.86□□□□□ -1.47
SYNE4Q8N205 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE4Q8N205 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.86□□□□□ -1.47
SYNE4Q8N205 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.86□□□□□ -1.47
SYNE4Q8N205 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.86□□□□□ -1.47
SYNE4Q8N205 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.86□□□□□ -1.47
SYNE4Q8N205 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.86□□□□□ -1.47
SYNE4Q8N205 AC010735.1-201ENST00000567305 1026 ntBASIC5.86□□□□□ -1.47
SYNE4Q8N205 AC004987.4-201ENST00000603383 338 ntBASIC5.86□□□□□ -1.47
SYNE4Q8N205 AC115286.1-201ENST00000604298 434 ntBASIC5.86□□□□□ -1.47
SYNE4Q8N205 AL353600.1-201ENST00000608148 251 ntBASIC5.86□□□□□ -1.47
SYNE4Q8N205 AL031667.3-201ENST00000620124 655 ntBASIC5.86□□□□□ -1.47
SYNE4Q8N205 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
SYNE4Q8N205 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE4Q8N205 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE4Q8N205 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SYNE4Q8N205 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE4Q8N205 AL731566.1-201ENST00000620490 1937 ntBASIC5.86□□□□□ -1.47
SYNE4Q8N205 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
SYNE4Q8N205 AC093909.5-201ENST00000621839 1799 ntBASIC5.85□□□□□ -1.47
SYNE4Q8N205 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SYNE4Q8N205 AC003985.2-201ENST00000562268 1669 ntBASIC5.85□□□□□ -1.47
SYNE4Q8N205 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SYNE4Q8N205 AC002525.1-201ENST00000624392 1622 ntBASIC5.85□□□□□ -1.47
SYNE4Q8N205 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SYNE4Q8N205 AP000756.2-201ENST00000624168 2567 ntBASIC5.85□□□□□ -1.47
SYNE4Q8N205 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SYNE4Q8N205 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
SYNE4Q8N205 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
SYNE4Q8N205 SGO1P1-201ENST00000603525 1447 ntBASIC5.85□□□□□ -1.47
SYNE4Q8N205 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.85□□□□□ -1.47
SYNE4Q8N205 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
SYNE4Q8N205 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SYNE4Q8N205 RNU1-64P-201ENST00000365443 163 ntBASIC5.85□□□□□ -1.47
SYNE4Q8N205 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
SYNE4Q8N205 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.85□□□□□ -1.47
SYNE4Q8N205 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.85□□□□□ -1.47
SYNE4Q8N205 AL158825.1-201ENST00000414735 521 ntBASIC5.85□□□□□ -1.47
SYNE4Q8N205 UBE2V1P9-201ENST00000414760 368 ntBASIC5.85□□□□□ -1.47
SYNE4Q8N205 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.85□□□□□ -1.47
SYNE4Q8N205 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.85□□□□□ -1.47
SYNE4Q8N205 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.85□□□□□ -1.47
SYNE4Q8N205 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SYNE4Q8N205 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.85□□□□□ -1.47
SYNE4Q8N205 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC5.85□□□□□ -1.47
SYNE4Q8N205 ATG12P2-201ENST00000456830 416 ntBASIC5.85□□□□□ -1.47
SYNE4Q8N205 RPL7P32-201ENST00000457119 744 ntBASIC5.85□□□□□ -1.47
SYNE4Q8N205 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.85□□□□□ -1.47
SYNE4Q8N205 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.85□□□□□ -1.47
SYNE4Q8N205 MRPS33P3-201ENST00000513456 322 ntBASIC5.85□□□□□ -1.47
SYNE4Q8N205 Y_RNA.719-201ENST00000517156 106 ntBASIC5.85□□□□□ -1.47
SYNE4Q8N205 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.85□□□□□ -1.47
SYNE4Q8N205 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.85□□□□□ -1.47
SYNE4Q8N205 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC5.85□□□□□ -1.47
SYNE4Q8N205 MTCO2P15-201ENST00000532655 656 ntBASIC5.85□□□□□ -1.47
SYNE4Q8N205 MIR4429-201ENST00000580105 73 ntBASIC5.85□□□□□ -1.47
SYNE4Q8N205 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.85□□□□□ -1.47
SYNE4Q8N205 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms