Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AL683813.2-201ENST00000605245 502 ntBASIC7.25□□□□□ -1.25
SCUBE3Q8IX30 AC141273.2-201ENST00000618989 130 ntBASIC7.25□□□□□ -1.25
SCUBE3Q8IX30 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC7.25□□□□□ -1.25
SCUBE3Q8IX30 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
SCUBE3Q8IX30 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.25□□□□□ -1.25
SCUBE3Q8IX30 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SCUBE3Q8IX30 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SCUBE3Q8IX30 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.25□□□□□ -1.25
SCUBE3Q8IX30 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SCUBE3Q8IX30 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
SCUBE3Q8IX30 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.25□□□□□ -1.25
SCUBE3Q8IX30 DLEU2L-201ENST00000371086 3555 ntBASIC7.25□□□□□ -1.25
SCUBE3Q8IX30 AC004014.2-201ENST00000623718 5122 ntBASIC7.25□□□□□ -1.25
SCUBE3Q8IX30 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SCUBE3Q8IX30 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7.25□□□□□ -1.25
SCUBE3Q8IX30 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.25□□□□□ -1.25
SCUBE3Q8IX30 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SCUBE3Q8IX30 AL512329.1-201ENST00000404600 1592 ntBASIC7.25□□□□□ -1.25
SCUBE3Q8IX30 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.25□□□□□ -1.25
SCUBE3Q8IX30 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 RPL23AP57-201ENST00000332361 466 ntBASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 RPL7P60-201ENST00000397636 735 ntBASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 PRELID3BP11-201ENST00000414230 479 ntBASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 RPSAP60-201ENST00000415403 880 ntBASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 CHIAP3-201ENST00000423668 1133 ntBASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 ARL5AP4-201ENST00000430731 512 ntBASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 PUDPP2-201ENST00000431423 643 ntBASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 RPS20P5-201ENST00000434808 360 ntBASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 AL138799.3-201ENST00000438968 350 ntBASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 AC073109.1-201ENST00000445066 978 ntBASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 RN7SL790P-201ENST00000474043 298 ntBASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 RPL5P22-201ENST00000480199 884 ntBASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 AL049874.2-201ENST00000492636 288 ntBASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 AC002456.2-201ENST00000509356 380 ntBASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 RNU6-408P-201ENST00000515910 100 ntBASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 SNORD27.1-201ENST00000516319 72 ntBASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 RN7SKP219-201ENST00000516825 296 ntBASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 MYL12AP1-201ENST00000518490 515 ntBASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 AC125612.1-201ENST00000547580 377 ntBASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 AC124068.1-201ENST00000563131 678 ntBASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 AL513327.3-201ENST00000602618 469 ntBASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 AC104695.3-201ENST00000604052 296 ntBASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 AC015712.7-201ENST00000615211 635 ntBASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 AC140479.4-205ENST00000636339 820 ntBASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 AC007012.2-201ENST00000623206 1676 ntBASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 PARP4P1-201ENST00000435945 2337 ntBASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 CTAGE11P-201ENST00000451540 2353 ntBASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 AC130304.1-201ENST00000622942 2385 ntBASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.24□□□□□ -1.25
SCUBE3Q8IX30 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.23□□□□□ -1.25
SCUBE3Q8IX30 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SCUBE3Q8IX30 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SCUBE3Q8IX30 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
SCUBE3Q8IX30 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.23□□□□□ -1.25
SCUBE3Q8IX30 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SCUBE3Q8IX30 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SCUBE3Q8IX30 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms