Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 ANKRD36P1-201ENST00000344424 659 ntBASIC5.24□□□□□ -1.57
HERC6Q8IVU3 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
HERC6Q8IVU3 SNORA51.12-201ENST00000384448 134 ntBASIC5.24□□□□□ -1.57
HERC6Q8IVU3 MIR23A-201ENST00000385245 73 ntBASIC5.24□□□□□ -1.57
HERC6Q8IVU3 MIR92A2-201ENST00000385299 75 ntBASIC5.24□□□□□ -1.57
HERC6Q8IVU3 SNORA48.7-201ENST00000391302 135 ntBASIC5.24□□□□□ -1.57
HERC6Q8IVU3 SNORA11C-201ENST00000408532 129 ntBASIC5.24□□□□□ -1.57
HERC6Q8IVU3 RN7SKP263-201ENST00000411194 309 ntBASIC5.24□□□□□ -1.57
HERC6Q8IVU3 ATG4AP1-201ENST00000416893 538 ntBASIC5.24□□□□□ -1.57
HERC6Q8IVU3 AC234782.4-201ENST00000417646 1048 ntBASIC5.24□□□□□ -1.57
HERC6Q8IVU3 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.24□□□□□ -1.57
HERC6Q8IVU3 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.24□□□□□ -1.57
HERC6Q8IVU3 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.24□□□□□ -1.57
HERC6Q8IVU3 CDC27P1-201ENST00000445384 715 ntBASIC5.24□□□□□ -1.57
HERC6Q8IVU3 AL358794.1-201ENST00000445689 381 ntBASIC5.24□□□□□ -1.57
HERC6Q8IVU3 AL606517.1-201ENST00000446914 387 ntBASIC5.24□□□□□ -1.57
HERC6Q8IVU3 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.24□□□□□ -1.57
HERC6Q8IVU3 CDC42P1-201ENST00000456658 548 ntBASIC5.24□□□□□ -1.57
HERC6Q8IVU3 AC021660.1-201ENST00000465006 554 ntBASIC5.24□□□□□ -1.57
HERC6Q8IVU3 AC011276.1-201ENST00000469688 323 ntBASIC5.24□□□□□ -1.57
HERC6Q8IVU3 AC104971.1-201ENST00000495117 578 ntBASIC5.24□□□□□ -1.57
HERC6Q8IVU3 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.24□□□□□ -1.57
HERC6Q8IVU3 AC096571.1-202ENST00000506634 735 ntBASIC5.24□□□□□ -1.57
HERC6Q8IVU3 RNU6-347P-201ENST00000516658 105 ntBASIC5.24□□□□□ -1.57
HERC6Q8IVU3 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.24□□□□□ -1.57
HERC6Q8IVU3 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.24□□□□□ -1.57
HERC6Q8IVU3 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.24□□□□□ -1.57
HERC6Q8IVU3 AC133555.2-201ENST00000550213 292 ntBASIC5.24□□□□□ -1.57
HERC6Q8IVU3 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.24□□□□□ -1.57
HERC6Q8IVU3 AC068831.4-201ENST00000556118 109 ntBASIC5.24□□□□□ -1.57
HERC6Q8IVU3 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.24□□□□□ -1.57
HERC6Q8IVU3 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.24□□□□□ -1.57
HERC6Q8IVU3 MIR3939-201ENST00000582614 106 ntBASIC5.24□□□□□ -1.57
HERC6Q8IVU3 VN1R88P-201ENST00000596787 292 ntBASIC5.24□□□□□ -1.57
HERC6Q8IVU3 BNIP3P33-201ENST00000598912 569 ntBASIC5.24□□□□□ -1.57
HERC6Q8IVU3 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.24□□□□□ -1.57
HERC6Q8IVU3 RNF138P2-201ENST00000603490 592 ntBASIC5.24□□□□□ -1.57
HERC6Q8IVU3 AL049794.2-201ENST00000616301 365 ntBASIC5.24□□□□□ -1.57
HERC6Q8IVU3 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.24□□□□□ -1.57
HERC6Q8IVU3 ATE1-AS1-202ENST00000636460 506 ntBASIC5.24□□□□□ -1.57
HERC6Q8IVU3 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HERC6Q8IVU3 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HERC6Q8IVU3 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HERC6Q8IVU3 AC104623.2-202ENST00000623477 4002 ntBASIC5.24□□□□□ -1.57
HERC6Q8IVU3 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.24□□□□□ -1.57
HERC6Q8IVU3 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HERC6Q8IVU3 AC022031.1-201ENST00000585985 2593 ntBASIC5.24□□□□□ -1.57
HERC6Q8IVU3 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
HERC6Q8IVU3 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HERC6Q8IVU3 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HERC6Q8IVU3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HERC6Q8IVU3 AC090017.1-201ENST00000548612 1779 ntBASIC5.24□□□□□ -1.57
HERC6Q8IVU3 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.24□□□□□ -1.57
HERC6Q8IVU3 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.23□□□□□ -1.57
HERC6Q8IVU3 AC093591.2-201ENST00000565254 3843 ntBASIC5.23□□□□□ -1.57
HERC6Q8IVU3 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.23□□□□□ -1.57
HERC6Q8IVU3 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.23□□□□□ -1.57
HERC6Q8IVU3 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
HERC6Q8IVU3 AL357515.1-201ENST00000402967 542 ntBASIC5.23□□□□□ -1.57
HERC6Q8IVU3 AL035079.1-201ENST00000405210 287 ntBASIC5.23□□□□□ -1.57
HERC6Q8IVU3 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.23□□□□□ -1.57
HERC6Q8IVU3 AC092638.1-201ENST00000411966 1275 ntBASIC5.23□□□□□ -1.57
HERC6Q8IVU3 CTSL3P-202ENST00000412179 788 ntBASIC5.23□□□□□ -1.57
HERC6Q8IVU3 MTCO2P8-201ENST00000412213 658 ntBASIC5.23□□□□□ -1.57
HERC6Q8IVU3 USP9YP21-201ENST00000420603 432 ntBASIC5.23□□□□□ -1.57
HERC6Q8IVU3 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.23□□□□□ -1.57
HERC6Q8IVU3 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.23□□□□□ -1.57
HERC6Q8IVU3 NPM1P24-201ENST00000428039 894 ntBASIC5.23□□□□□ -1.57
HERC6Q8IVU3 AP001324.1-201ENST00000428553 399 ntBASIC5.23□□□□□ -1.57
HERC6Q8IVU3 AC004854.1-201ENST00000440356 349 ntBASIC5.23□□□□□ -1.57
HERC6Q8IVU3 AL450023.3-201ENST00000440592 271 ntBASIC5.23□□□□□ -1.57
HERC6Q8IVU3 AL162591.2-201ENST00000449634 317 ntBASIC5.23□□□□□ -1.57
HERC6Q8IVU3 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC5.23□□□□□ -1.57
HERC6Q8IVU3 AC079203.1-201ENST00000487972 404 ntBASIC5.23□□□□□ -1.57
HERC6Q8IVU3 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC5.23□□□□□ -1.57
HERC6Q8IVU3 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.23□□□□□ -1.57
HERC6Q8IVU3 NPM1P6-201ENST00000521088 871 ntBASIC5.23□□□□□ -1.57
HERC6Q8IVU3 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.23□□□□□ -1.57
HERC6Q8IVU3 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HERC6Q8IVU3 NDUFB4P11-201ENST00000560510 395 ntBASIC5.23□□□□□ -1.57
HERC6Q8IVU3 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.23□□□□□ -1.57
HERC6Q8IVU3 AC022884.2-201ENST00000578535 580 ntBASIC5.23□□□□□ -1.57
HERC6Q8IVU3 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.23□□□□□ -1.57
HERC6Q8IVU3 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.23□□□□□ -1.57
HERC6Q8IVU3 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HERC6Q8IVU3 BNIP3P4-201ENST00000604946 565 ntBASIC5.23□□□□□ -1.57
HERC6Q8IVU3 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HERC6Q8IVU3 AC010424.2-201ENST00000607594 443 ntBASIC5.23□□□□□ -1.57
HERC6Q8IVU3 AL161637.1-201ENST00000622380 412 ntBASIC5.23□□□□□ -1.57
HERC6Q8IVU3 CR392039.4-201ENST00000624968 501 ntBASIC5.23□□□□□ -1.57
HERC6Q8IVU3 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HERC6Q8IVU3 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
HERC6Q8IVU3 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
HERC6Q8IVU3 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HERC6Q8IVU3 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
HERC6Q8IVU3 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
HERC6Q8IVU3 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
HERC6Q8IVU3 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HERC6Q8IVU3 A2MP1-204ENST00000566278 4130 ntBASIC5.23□□□□□ -1.57
HERC6Q8IVU3 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms