Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.98□□□□□ -1.29
RNF135Q8IUD6 AC087575.1-201ENST00000585087 229 ntBASIC6.98□□□□□ -1.29
RNF135Q8IUD6 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.98□□□□□ -1.29
RNF135Q8IUD6 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6.98□□□□□ -1.29
RNF135Q8IUD6 AC004908.1-201ENST00000606572 541 ntBASIC6.98□□□□□ -1.29
RNF135Q8IUD6 AC079776.5-201ENST00000641920 211 ntBASIC6.98□□□□□ -1.29
RNF135Q8IUD6 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.98□□□□□ -1.29
RNF135Q8IUD6 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.98□□□□□ -1.29
RNF135Q8IUD6 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.98□□□□□ -1.29
RNF135Q8IUD6 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RNF135Q8IUD6 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.98□□□□□ -1.29
RNF135Q8IUD6 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
RNF135Q8IUD6 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
RNF135Q8IUD6 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
RNF135Q8IUD6 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RNF135Q8IUD6 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
RNF135Q8IUD6 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
RNF135Q8IUD6 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.98□□□□□ -1.29
RNF135Q8IUD6 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.98□□□□□ -1.29
RNF135Q8IUD6 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 RNU6-1120P-201ENST00000362988 108 ntBASIC6.97□□□□□ -1.29
RNF135Q8IUD6 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 MIR137-201ENST00000385223 102 ntBASIC6.97□□□□□ -1.29
RNF135Q8IUD6 RNU6-1158P-201ENST00000391167 107 ntBASIC6.97□□□□□ -1.29
RNF135Q8IUD6 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 HMGB3P7-201ENST00000400214 611 ntBASIC6.97□□□□□ -1.29
RNF135Q8IUD6 DHFRP6-201ENST00000401776 268 ntBASIC6.97□□□□□ -1.29
RNF135Q8IUD6 BTBD10P2-201ENST00000404779 676 ntBASIC6.97□□□□□ -1.29
RNF135Q8IUD6 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 RN7SKP29-201ENST00000410957 272 ntBASIC6.97□□□□□ -1.29
RNF135Q8IUD6 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 ELOCP4-201ENST00000420090 333 ntBASIC6.97□□□□□ -1.29
RNF135Q8IUD6 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 MTCO3P21-201ENST00000430791 643 ntBASIC6.97□□□□□ -1.29
RNF135Q8IUD6 BX679664.2-201ENST00000439282 283 ntBASIC6.97□□□□□ -1.29
RNF135Q8IUD6 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 AC104837.1-201ENST00000444644 1587 ntBASIC6.97□□□□□ -1.29
RNF135Q8IUD6 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 MTND5P16-201ENST00000460269 1703 ntBASIC6.97□□□□□ -1.29
RNF135Q8IUD6 AC026410.2-201ENST00000460281 156 ntBASIC6.97□□□□□ -1.29
RNF135Q8IUD6 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 AL390198.2-201ENST00000510553 222 ntBASIC6.97□□□□□ -1.29
RNF135Q8IUD6 RNA5SP401-201ENST00000515920 127 ntBASIC6.97□□□□□ -1.29
RNF135Q8IUD6 RNU6-714P-201ENST00000516963 103 ntBASIC6.97□□□□□ -1.29
RNF135Q8IUD6 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 CTSLP2-201ENST00000580501 394 ntBASIC6.97□□□□□ -1.29
RNF135Q8IUD6 SNORD39.3-201ENST00000584451 71 ntBASIC6.97□□□□□ -1.29
RNF135Q8IUD6 AC013244.1-201ENST00000604279 193 ntBASIC6.97□□□□□ -1.29
RNF135Q8IUD6 AC111186.1-201ENST00000604684 130 ntBASIC6.97□□□□□ -1.29
RNF135Q8IUD6 SNORD96A-201ENST00000606577 79 ntBASIC6.97□□□□□ -1.29
RNF135Q8IUD6 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 AL603758.1-201ENST00000618654 241 ntBASIC6.97□□□□□ -1.29
RNF135Q8IUD6 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 AC073488.6-201ENST00000632293 754 ntBASIC6.97□□□□□ -1.29
RNF135Q8IUD6 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 MROH3P-201ENST00000435735 2676 ntBASIC6.97□□□□□ -1.29
RNF135Q8IUD6 AL121768.1-201ENST00000613917 2544 ntBASIC6.97□□□□□ -1.29
RNF135Q8IUD6 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 SMG1P5-202ENST00000529428 4219 ntBASIC6.97□□□□□ -1.29
RNF135Q8IUD6 SMG1P2-201ENST00000566127 4221 ntBASIC6.97□□□□□ -1.29
RNF135Q8IUD6 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 MTND5P3-201ENST00000438536 1800 ntBASIC6.97□□□□□ -1.29
RNF135Q8IUD6 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
RNF135Q8IUD6 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.29
RNF135Q8IUD6 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
RNF135Q8IUD6 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.96□□□□□ -1.29
RNF135Q8IUD6 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
RNF135Q8IUD6 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.29
RNF135Q8IUD6 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.96□□□□□ -1.29
RNF135Q8IUD6 MTND4P14-201ENST00000435799 1354 ntBASIC6.96□□□□□ -1.29
RNF135Q8IUD6 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.29
RNF135Q8IUD6 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.29
RNF135Q8IUD6 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
RNF135Q8IUD6 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
RNF135Q8IUD6 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms