Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.45□□□□□ -1.7
SHFQ7M4L6 NIP7P2-201ENST00000485801 544 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 AC005912.1-201ENST00000495392 255 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 AC108693.1-201ENST00000496068 432 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 AL136038.1-201ENST00000497246 351 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.45□□□□□ -1.7
SHFQ7M4L6 IGBP1P5-201ENST00000507524 1000 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.45□□□□□ -1.7
SHFQ7M4L6 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.45□□□□□ -1.7
SHFQ7M4L6 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.45□□□□□ -1.7
SHFQ7M4L6 IGKV2-36-201ENST00000519999 223 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.45□□□□□ -1.7
SHFQ7M4L6 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.45□□□□□ -1.7
SHFQ7M4L6 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.45□□□□□ -1.7
SHFQ7M4L6 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.45□□□□□ -1.7
SHFQ7M4L6 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.45□□□□□ -1.7
SHFQ7M4L6 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.45□□□□□ -1.7
SHFQ7M4L6 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.45□□□□□ -1.7
SHFQ7M4L6 AC087477.6-201ENST00000559595 843 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 AC090751.1-201ENST00000566966 267 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 MIR3912-201ENST00000577566 105 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 MIR3614-201ENST00000581261 86 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.45□□□□□ -1.7
SHFQ7M4L6 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.45□□□□□ -1.7
SHFQ7M4L6 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.45□□□□□ -1.7
SHFQ7M4L6 AC023509.5-201ENST00000617434 807 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 MIR6861-201ENST00000618657 64 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.45□□□□□ -1.7
SHFQ7M4L6 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.45□□□□□ -1.7
SHFQ7M4L6 AC006840.1-201ENST00000623069 542 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SHFQ7M4L6 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
SHFQ7M4L6 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
SHFQ7M4L6 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
SHFQ7M4L6 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHFQ7M4L6 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHFQ7M4L6 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHFQ7M4L6 AC139713.2-215ENST00000641428 5037 ntBASIC4.45□□□□□ -1.7
SHFQ7M4L6 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SHFQ7M4L6 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SHFQ7M4L6 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SHFQ7M4L6 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
SHFQ7M4L6 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.44□□□□□ -1.7
SHFQ7M4L6 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SHFQ7M4L6 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SHFQ7M4L6 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.44□□□□□ -1.7
SHFQ7M4L6 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SHFQ7M4L6 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SHFQ7M4L6 AC008549.2-201ENST00000333482 706 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 MIR323A-201ENST00000362199 86 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 RNU1-94P-201ENST00000362627 173 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 SNORA17.1-201ENST00000362945 126 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 MIR16-1-201ENST00000385271 89 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 SFR1P1-201ENST00000403720 688 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 RN7SKP114-201ENST00000410327 279 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.44□□□□□ -1.7
SHFQ7M4L6 E2F6P2-201ENST00000420708 748 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 EIF4HP2-201ENST00000424380 563 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 AC073069.1-201ENST00000428657 441 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 DYNLL1P7-201ENST00000429273 258 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 MTCO1P3-201ENST00000429327 192 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 MTND5P25-201ENST00000430499 799 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.44□□□□□ -1.7
SHFQ7M4L6 RPL21P110-201ENST00000433345 446 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.44□□□□□ -1.7
SHFQ7M4L6 Z83846.1-201ENST00000446798 265 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 AC079776.3-201ENST00000450665 370 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.44□□□□□ -1.7
SHFQ7M4L6 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.44□□□□□ -1.7
SHFQ7M4L6 RPL23AP71-201ENST00000470966 469 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 OR2AO1P-201ENST00000476497 403 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 AC020890.1-201ENST00000491837 504 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.44□□□□□ -1.7
SHFQ7M4L6 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.44□□□□□ -1.7
SHFQ7M4L6 RPL7L1P4-201ENST00000513004 707 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 SNORA3.4-201ENST00000515969 96 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 RN7SKP260-201ENST00000516907 149 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.44□□□□□ -1.7
SHFQ7M4L6 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.44□□□□□ -1.7
SHFQ7M4L6 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.44□□□□□ -1.7
SHFQ7M4L6 AC007834.2-201ENST00000536310 343 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 OSBPL9P5-201ENST00000542581 171 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.44□□□□□ -1.7
SHFQ7M4L6 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.44□□□□□ -1.7
SHFQ7M4L6 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.44□□□□□ -1.7
SHFQ7M4L6 AGGF1P6-201ENST00000569213 976 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SHFQ7M4L6 AC008088.1-201ENST00000580993 280 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 AC090312.2-201ENST00000582687 378 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 AC013444.2-201ENST00000603317 787 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 AC114878.2-201ENST00000604863 1251 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 AC087783.2-201ENST00000605070 562 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 AC015982.1-201ENST00000608113 465 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 AC079395.2-201ENST00000610982 737 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 AC093783.1-201ENST00000612976 329 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 AL353726.1-201ENST00000614041 1000 ntBASIC4.44□□□□□ -1.7
SHFQ7M4L6 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.44□□□□□ -1.7
SHFQ7M4L6 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms