Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC6.34□□□□□ -1.39
RNF43Q68DV7 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC6.34□□□□□ -1.39
RNF43Q68DV7 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC6.34□□□□□ -1.39
RNF43Q68DV7 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC6.34□□□□□ -1.39
RNF43Q68DV7 SEPT7P5-201ENST00000434048 306 ntBASIC6.34□□□□□ -1.39
RNF43Q68DV7 UBE2FP3-201ENST00000436366 524 ntBASIC6.34□□□□□ -1.39
RNF43Q68DV7 AL353662.1-201ENST00000439099 327 ntBASIC6.34□□□□□ -1.39
RNF43Q68DV7 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.34□□□□□ -1.39
RNF43Q68DV7 IPO7P1-201ENST00000442031 636 ntBASIC6.34□□□□□ -1.39
RNF43Q68DV7 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC6.34□□□□□ -1.39
RNF43Q68DV7 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.34□□□□□ -1.39
RNF43Q68DV7 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.34□□□□□ -1.39
RNF43Q68DV7 ARPC3P5-201ENST00000448802 534 ntBASIC6.34□□□□□ -1.39
RNF43Q68DV7 BX842559.2-201ENST00000451418 605 ntBASIC6.34□□□□□ -1.39
RNF43Q68DV7 CFL1P4-201ENST00000451536 498 ntBASIC6.34□□□□□ -1.39
RNF43Q68DV7 VPS25P1-201ENST00000455691 508 ntBASIC6.34□□□□□ -1.39
RNF43Q68DV7 AC093166.4-201ENST00000457867 318 ntBASIC6.34□□□□□ -1.39
RNF43Q68DV7 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.34□□□□□ -1.39
RNF43Q68DV7 Y_RNA.710-201ENST00000516975 110 ntBASIC6.34□□□□□ -1.39
RNF43Q68DV7 RNA5SP340-201ENST00000517132 107 ntBASIC6.34□□□□□ -1.39
RNF43Q68DV7 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC6.34□□□□□ -1.39
RNF43Q68DV7 AP003396.4-201ENST00000527574 265 ntBASIC6.34□□□□□ -1.39
RNF43Q68DV7 OR5AP1P-201ENST00000529730 940 ntBASIC6.34□□□□□ -1.39
RNF43Q68DV7 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.34□□□□□ -1.39
RNF43Q68DV7 AL512360.1-201ENST00000555346 234 ntBASIC6.34□□□□□ -1.39
RNF43Q68DV7 AC007956.1-201ENST00000555623 542 ntBASIC6.34□□□□□ -1.39
RNF43Q68DV7 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC6.34□□□□□ -1.39
RNF43Q68DV7 AC107954.1-201ENST00000565906 727 ntBASIC6.34□□□□□ -1.39
RNF43Q68DV7 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.34□□□□□ -1.39
RNF43Q68DV7 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.34□□□□□ -1.39
RNF43Q68DV7 MIR4666A-201ENST00000580160 79 ntBASIC6.34□□□□□ -1.39
RNF43Q68DV7 AP001004.1-201ENST00000582468 324 ntBASIC6.34□□□□□ -1.39
RNF43Q68DV7 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC6.34□□□□□ -1.39
RNF43Q68DV7 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.34□□□□□ -1.39
RNF43Q68DV7 BNIP3P8-201ENST00000597863 560 ntBASIC6.34□□□□□ -1.39
RNF43Q68DV7 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
RNF43Q68DV7 NRBF2P5-201ENST00000603087 788 ntBASIC6.34□□□□□ -1.39
RNF43Q68DV7 MTCO2P22-201ENST00000603246 681 ntBASIC6.34□□□□□ -1.39
RNF43Q68DV7 CRYM-AS1-204ENST00000637983 556 ntBASIC6.34□□□□□ -1.39
RNF43Q68DV7 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.34□□□□□ -1.39
RNF43Q68DV7 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RNF43Q68DV7 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.34□□□□□ -1.39
RNF43Q68DV7 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
RNF43Q68DV7 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
RNF43Q68DV7 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
RNF43Q68DV7 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.34□□□□□ -1.39
RNF43Q68DV7 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RNF43Q68DV7 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.34□□□□□ -1.39
RNF43Q68DV7 AC022325.1-201ENST00000502748 2199 ntBASIC6.34□□□□□ -1.4
RNF43Q68DV7 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.4
RNF43Q68DV7 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.34□□□□□ -1.4
RNF43Q68DV7 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
RNF43Q68DV7 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF43Q68DV7 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF43Q68DV7 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF43Q68DV7 AC022164.1-201ENST00000568767 2673 ntBASIC6.33□□□□□ -1.4
RNF43Q68DV7 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF43Q68DV7 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RNF43Q68DV7 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF43Q68DV7 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF43Q68DV7 DCAF13P3-201ENST00000561147 1334 ntBASIC6.33□□□□□ -1.4
RNF43Q68DV7 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF43Q68DV7 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF43Q68DV7 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RNF43Q68DV7 RNU6-845P-201ENST00000362578 103 ntBASIC6.33□□□□□ -1.4
RNF43Q68DV7 SNORD81.2-201ENST00000365153 76 ntBASIC6.33□□□□□ -1.4
RNF43Q68DV7 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF43Q68DV7 RNU6-767P-201ENST00000384132 107 ntBASIC6.33□□□□□ -1.4
RNF43Q68DV7 RNU6-878P-201ENST00000384578 110 ntBASIC6.33□□□□□ -1.4
RNF43Q68DV7 AC104297.1-201ENST00000393779 870 ntBASIC6.33□□□□□ -1.4
RNF43Q68DV7 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF43Q68DV7 AL356432.1-201ENST00000405809 419 ntBASIC6.33□□□□□ -1.4
RNF43Q68DV7 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.33□□□□□ -1.4
RNF43Q68DV7 RN7SKP151-201ENST00000410230 316 ntBASIC6.33□□□□□ -1.4
RNF43Q68DV7 RN7SKP17-201ENST00000411242 351 ntBASIC6.33□□□□□ -1.4
RNF43Q68DV7 RPL26P29-201ENST00000415623 438 ntBASIC6.33□□□□□ -1.4
RNF43Q68DV7 SDCBPP1-201ENST00000440192 890 ntBASIC6.33□□□□□ -1.4
RNF43Q68DV7 AC140076.1-201ENST00000449897 361 ntBASIC6.33□□□□□ -1.4
RNF43Q68DV7 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC6.33□□□□□ -1.4
RNF43Q68DV7 SNRPGP6-201ENST00000451124 220 ntBASIC6.33□□□□□ -1.4
RNF43Q68DV7 RPL38P1-201ENST00000460914 211 ntBASIC6.33□□□□□ -1.4
RNF43Q68DV7 AC087312.1-201ENST00000471411 480 ntBASIC6.33□□□□□ -1.4
RNF43Q68DV7 EIF3LP3-201ENST00000495197 822 ntBASIC6.33□□□□□ -1.4
RNF43Q68DV7 SETP14-201ENST00000497538 873 ntBASIC6.33□□□□□ -1.4
RNF43Q68DV7 AC008629.2-201ENST00000503783 483 ntBASIC6.33□□□□□ -1.4
RNF43Q68DV7 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC6.33□□□□□ -1.4
RNF43Q68DV7 CYP4F27P-201ENST00000514557 494 ntBASIC6.33□□□□□ -1.4
RNF43Q68DV7 AC068305.2-201ENST00000550567 1205 ntBASIC6.33□□□□□ -1.4
RNF43Q68DV7 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.33□□□□□ -1.4
RNF43Q68DV7 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.33□□□□□ -1.4
RNF43Q68DV7 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF43Q68DV7 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.33□□□□□ -1.4
RNF43Q68DV7 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF43Q68DV7 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.33□□□□□ -1.4
RNF43Q68DV7 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.33□□□□□ -1.4
RNF43Q68DV7 AC025857.2-201ENST00000602711 238 ntBASIC6.33□□□□□ -1.4
RNF43Q68DV7 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF43Q68DV7 SDR42E1P1-201ENST00000611327 477 ntBASIC6.33□□□□□ -1.4
RNF43Q68DV7 AC073488.3-201ENST00000631611 778 ntBASIC6.33□□□□□ -1.4
RNF43Q68DV7 ZNF33BP1-201ENST00000452497 1834 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms