Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AL445669.1-201ENST00000426743 755 ntBASIC7.65□□□□□ -1.18
RC3H1Q5TC82 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC7.65□□□□□ -1.18
RC3H1Q5TC82 SNRPEP4-201ENST00000435815 279 ntBASIC7.65□□□□□ -1.18
RC3H1Q5TC82 SEPT14P3-201ENST00000439401 183 ntBASIC7.65□□□□□ -1.18
RC3H1Q5TC82 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.65□□□□□ -1.18
RC3H1Q5TC82 AL732372.2-207ENST00000445840 183 ntBASIC7.65□□□□□ -1.18
RC3H1Q5TC82 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC7.65□□□□□ -1.18
RC3H1Q5TC82 AL590365.1-201ENST00000450788 243 ntBASIC7.65□□□□□ -1.18
RC3H1Q5TC82 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.65□□□□□ -1.18
RC3H1Q5TC82 SEPT14P2-201ENST00000453405 183 ntBASIC7.65□□□□□ -1.18
RC3H1Q5TC82 AC091564.1-201ENST00000464563 479 ntBASIC7.65□□□□□ -1.18
RC3H1Q5TC82 BIN2P1-201ENST00000504996 1530 ntBASIC7.65□□□□□ -1.18
RC3H1Q5TC82 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.18
RC3H1Q5TC82 AC098799.3-201ENST00000506095 438 ntBASIC7.65□□□□□ -1.18
RC3H1Q5TC82 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
RC3H1Q5TC82 KCTD9P2-201ENST00000512203 1013 ntBASIC7.65□□□□□ -1.18
RC3H1Q5TC82 SEPT14P4-201ENST00000513445 186 ntBASIC7.65□□□□□ -1.18
RC3H1Q5TC82 FO082796.1-201ENST00000523795 183 ntBASIC7.65□□□□□ -1.18
RC3H1Q5TC82 PHBP17-201ENST00000528576 541 ntBASIC7.65□□□□□ -1.18
RC3H1Q5TC82 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC7.65□□□□□ -1.18
RC3H1Q5TC82 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC7.65□□□□□ -1.18
RC3H1Q5TC82 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC7.65□□□□□ -1.18
RC3H1Q5TC82 MTND5P33-201ENST00000571250 1450 ntBASIC7.65□□□□□ -1.18
RC3H1Q5TC82 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC7.65□□□□□ -1.18
RC3H1Q5TC82 RNU4ATAC-201ENST00000580972 127 ntBASIC7.65□□□□□ -1.18
RC3H1Q5TC82 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC7.65□□□□□ -1.18
RC3H1Q5TC82 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.65□□□□□ -1.18
RC3H1Q5TC82 AC119403.2-201ENST00000590960 598 ntBASIC7.65□□□□□ -1.18
RC3H1Q5TC82 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
RC3H1Q5TC82 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC7.65□□□□□ -1.18
RC3H1Q5TC82 AC104010.1-201ENST00000616889 150 ntBASIC7.65□□□□□ -1.18
RC3H1Q5TC82 AP004607.9-201ENST00000618202 316 ntBASIC7.65□□□□□ -1.18
RC3H1Q5TC82 AC068722.2-201ENST00000618734 544 ntBASIC7.65□□□□□ -1.18
RC3H1Q5TC82 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC7.65□□□□□ -1.18
RC3H1Q5TC82 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC7.65□□□□□ -1.18
RC3H1Q5TC82 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
RC3H1Q5TC82 AC100810.6-201ENST00000638068 285 ntBASIC7.65□□□□□ -1.18
RC3H1Q5TC82 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
RC3H1Q5TC82 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
RC3H1Q5TC82 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 AC005261.2-201ENST00000593427 4258 ntBASIC7.64□□□□□ -1.19
RC3H1Q5TC82 AC021242.1-201ENST00000507315 2035 ntBASIC7.64□□□□□ -1.19
RC3H1Q5TC82 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 AC110373.1-201ENST00000505994 3505 ntBASIC7.64□□□□□ -1.19
RC3H1Q5TC82 AC107980.1-201ENST00000558671 3355 ntBASIC7.64□□□□□ -1.19
RC3H1Q5TC82 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 Y_RNA.259-201ENST00000364619 101 ntBASIC7.64□□□□□ -1.19
RC3H1Q5TC82 RN7SKP124-201ENST00000364730 341 ntBASIC7.64□□□□□ -1.19
RC3H1Q5TC82 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 SNRPEP6-201ENST00000407465 277 ntBASIC7.64□□□□□ -1.19
RC3H1Q5TC82 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 AL731563.1-201ENST00000442202 214 ntBASIC7.64□□□□□ -1.19
RC3H1Q5TC82 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 RPL23AP60-201ENST00000450011 454 ntBASIC7.64□□□□□ -1.19
RC3H1Q5TC82 AL133445.1-201ENST00000467051 452 ntBASIC7.64□□□□□ -1.19
RC3H1Q5TC82 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 COPS8P2-201ENST00000473228 627 ntBASIC7.64□□□□□ -1.19
RC3H1Q5TC82 MTND1P3-201ENST00000484956 952 ntBASIC7.64□□□□□ -1.19
RC3H1Q5TC82 RPL7L1P13-201ENST00000511702 739 ntBASIC7.64□□□□□ -1.19
RC3H1Q5TC82 AC034159.1-201ENST00000513885 583 ntBASIC7.64□□□□□ -1.19
RC3H1Q5TC82 RNY4P37-201ENST00000516225 96 ntBASIC7.64□□□□□ -1.19
RC3H1Q5TC82 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 RGS5-218ENST00000526176 574 ntTSL 4 BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 RPL21P5-201ENST00000554662 472 ntBASIC7.64□□□□□ -1.19
RC3H1Q5TC82 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 AC037198.3-201ENST00000616754 526 ntBASIC7.64□□□□□ -1.19
RC3H1Q5TC82 HOTTIP_3.1-201ENST00000619957 337 ntBASIC7.64□□□□□ -1.19
RC3H1Q5TC82 AC130448.2-201ENST00000624082 374 ntBASIC7.64□□□□□ -1.19
RC3H1Q5TC82 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 AP001541.1-201ENST00000623322 1904 ntBASIC7.64□□□□□ -1.19
RC3H1Q5TC82 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 AL136531.3-201ENST00000624378 3658 ntBASIC7.64□□□□□ -1.19
RC3H1Q5TC82 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
RC3H1Q5TC82 MFSD8-217ENST00000641178 4374 ntBASIC7.64□□□□□ -1.19
RC3H1Q5TC82 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms