Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC38Q502W7 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC38Q502W7 IL6STP1-201ENST00000346911 1020 ntBASIC5.18□□□□□ -1.58
CCDC38Q502W7 RNU1-43P-201ENST00000365052 165 ntBASIC5.18□□□□□ -1.58
CCDC38Q502W7 SNORA2.3-201ENST00000383920 135 ntBASIC5.18□□□□□ -1.58
CCDC38Q502W7 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC38Q502W7 CNOT7P1-201ENST00000429006 852 ntBASIC5.18□□□□□ -1.58
CCDC38Q502W7 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.18□□□□□ -1.58
CCDC38Q502W7 MTND6P18-201ENST00000439477 513 ntBASIC5.18□□□□□ -1.58
CCDC38Q502W7 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC38Q502W7 EEF1A1P39-201ENST00000440791 250 ntBASIC5.18□□□□□ -1.58
CCDC38Q502W7 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC38Q502W7 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC38Q502W7 AC009127.1-201ENST00000467090 155 ntBASIC5.18□□□□□ -1.58
CCDC38Q502W7 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC38Q502W7 AC020699.1-201ENST00000505161 445 ntBASIC5.18□□□□□ -1.58
CCDC38Q502W7 AC113347.3-201ENST00000509113 148 ntBASIC5.18□□□□□ -1.58
CCDC38Q502W7 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
CCDC38Q502W7 ATP5LP3-201ENST00000514223 304 ntBASIC5.18□□□□□ -1.58
CCDC38Q502W7 RNU6-311P-201ENST00000516224 102 ntBASIC5.18□□□□□ -1.58
CCDC38Q502W7 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC38Q502W7 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CCDC38Q502W7 IGLV2-28-201ENST00000520681 304 ntBASIC5.18□□□□□ -1.58
CCDC38Q502W7 IGKV2-18-201ENST00000522607 343 ntBASIC5.18□□□□□ -1.58
CCDC38Q502W7 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC38Q502W7 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC38Q502W7 AC005868.1-201ENST00000536421 331 ntBASIC5.18□□□□□ -1.58
CCDC38Q502W7 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.18□□□□□ -1.58
CCDC38Q502W7 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC38Q502W7 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.18□□□□□ -1.58
CCDC38Q502W7 AC116553.2-201ENST00000564203 463 ntBASIC5.18□□□□□ -1.58
CCDC38Q502W7 MIR4512-201ENST00000583257 77 ntBASIC5.18□□□□□ -1.58
CCDC38Q502W7 BNIP3P38-201ENST00000601117 544 ntBASIC5.18□□□□□ -1.58
CCDC38Q502W7 RPL26P30-202ENST00000602923 645 ntBASIC5.18□□□□□ -1.58
CCDC38Q502W7 AC069304.3-201ENST00000603938 1084 ntBASIC5.18□□□□□ -1.58
CCDC38Q502W7 AP005432.2-201ENST00000608162 586 ntBASIC5.18□□□□□ -1.58
CCDC38Q502W7 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC38Q502W7 AC063944.3-201ENST00000609969 533 ntBASIC5.18□□□□□ -1.58
CCDC38Q502W7 MIR6837-201ENST00000620884 64 ntBASIC5.18□□□□□ -1.58
CCDC38Q502W7 AL157770.1-201ENST00000623049 439 ntBASIC5.18□□□□□ -1.58
CCDC38Q502W7 AP002505.2-201ENST00000623585 696 ntBASIC5.18□□□□□ -1.58
CCDC38Q502W7 LINC02211-204ENST00000642024 1070 ntBASIC5.18□□□□□ -1.58
CCDC38Q502W7 ASNSP1-201ENST00000518311 1939 ntBASIC5.18□□□□□ -1.58
CCDC38Q502W7 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CCDC38Q502W7 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.18□□□□□ -1.58
CCDC38Q502W7 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC38Q502W7 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.18□□□□□ -1.58
CCDC38Q502W7 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CCDC38Q502W7 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC38Q502W7 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.18□□□□□ -1.58
CCDC38Q502W7 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC38Q502W7 XPOTP1-201ENST00000443317 2398 ntBASIC5.18□□□□□ -1.58
CCDC38Q502W7 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC38Q502W7 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CCDC38Q502W7 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
CCDC38Q502W7 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC38Q502W7 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.17□□□□□ -1.58
CCDC38Q502W7 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CCDC38Q502W7 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC38Q502W7 HMGB1P5-201ENST00000255320 642 ntBASIC5.17□□□□□ -1.58
CCDC38Q502W7 RNU6-707P-201ENST00000364647 95 ntBASIC5.17□□□□□ -1.58
CCDC38Q502W7 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC38Q502W7 NUDT19P3-201ENST00000404698 555 ntBASIC5.17□□□□□ -1.58
CCDC38Q502W7 AL512430.2-201ENST00000406786 339 ntBASIC5.17□□□□□ -1.58
CCDC38Q502W7 RNA5SP146-201ENST00000410743 123 ntBASIC5.17□□□□□ -1.58
CCDC38Q502W7 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC38Q502W7 SSR1P2-201ENST00000415208 787 ntBASIC5.17□□□□□ -1.58
CCDC38Q502W7 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC38Q502W7 AL513175.2-201ENST00000422071 443 ntBASIC5.17□□□□□ -1.58
CCDC38Q502W7 MTCO1P3-201ENST00000429327 192 ntBASIC5.17□□□□□ -1.58
CCDC38Q502W7 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC38Q502W7 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC38Q502W7 ARL4AP3-201ENST00000441452 574 ntBASIC5.17□□□□□ -1.58
CCDC38Q502W7 RAB11AP1-201ENST00000442978 646 ntBASIC5.17□□□□□ -1.58
CCDC38Q502W7 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC38Q502W7 AC104306.1-201ENST00000449702 371 ntBASIC5.17□□□□□ -1.58
CCDC38Q502W7 RPL21P71-201ENST00000465598 459 ntBASIC5.17□□□□□ -1.58
CCDC38Q502W7 AC090114.3-201ENST00000479267 829 ntBASIC5.17□□□□□ -1.58
CCDC38Q502W7 AC024558.1-201ENST00000505008 528 ntBASIC5.17□□□□□ -1.58
CCDC38Q502W7 AC027308.1-201ENST00000517993 110 ntBASIC5.17□□□□□ -1.58
CCDC38Q502W7 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC38Q502W7 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.17□□□□□ -1.58
CCDC38Q502W7 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC38Q502W7 AL049779.2-201ENST00000553847 315 ntBASIC5.17□□□□□ -1.58
CCDC38Q502W7 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC38Q502W7 VN1R83P-201ENST00000595685 445 ntBASIC5.17□□□□□ -1.58
CCDC38Q502W7 AC008687.2-201ENST00000597865 520 ntBASIC5.17□□□□□ -1.58
CCDC38Q502W7 BNIP3P32-201ENST00000600015 554 ntBASIC5.17□□□□□ -1.58
CCDC38Q502W7 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC38Q502W7 AL390816.3-201ENST00000604527 1066 ntBASIC5.17□□□□□ -1.58
CCDC38Q502W7 AC105227.2-201ENST00000615075 605 ntBASIC5.17□□□□□ -1.58
CCDC38Q502W7 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC38Q502W7 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC38Q502W7 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.17□□□□□ -1.58
CCDC38Q502W7 AC124312.6-202ENST00000623624 418 ntBASIC5.17□□□□□ -1.58
CCDC38Q502W7 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC38Q502W7 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC38Q502W7 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC38Q502W7 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC38Q502W7 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms