Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 AP000756.2-201ENST00000624168 2567 ntBASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.29□□□□□ -1.72
PTPN20Q4JDL3 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 AC009951.1-201ENST00000623674 2614 ntBASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 Y_RNA.62-201ENST00000362840 99 ntBASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 RNA5SP130-201ENST00000364431 114 ntBASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 MRPL50P1-201ENST00000431951 384 ntBASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 ELOCP18-201ENST00000434209 337 ntBASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 ELOCP10-201ENST00000440624 327 ntBASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 RPL38P1-201ENST00000460914 211 ntBASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 RPL7P19-201ENST00000469948 618 ntBASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 AC025627.2-201ENST00000576220 160 ntBASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 ELOCP34-201ENST00000604436 327 ntBASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 AC015722.2-201ENST00000622210 551 ntBASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 AC067931.1-201ENST00000624190 671 ntBASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 AL773545.4-201ENST00000637262 310 ntBASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 AL513478.4-201ENST00000641636 310 ntBASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 AC010300.1-201ENST00000600671 5134 ntBASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 AC110792.3-201ENST00000595906 1614 ntBASIC4.28□□□□□ -1.72
PTPN20Q4JDL3 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 USP9YP4-201ENST00000424401 1745 ntBASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 AC009313.2-201ENST00000417893 1941 ntBASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 KPNA2P2-201ENST00000419546 1489 ntBASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 AL121657.1-201ENST00000327215 531 ntBASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 RPS20P1-201ENST00000434853 354 ntBASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 OR6C72P-201ENST00000451403 892 ntBASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 CLIC4P1-201ENST00000453177 535 ntBASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 SEPT14P1-201ENST00000458703 648 ntBASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 CEACAMP10-202ENST00000495431 496 ntBASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 NPM1P35-201ENST00000533043 868 ntBASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 AC022968.1-201ENST00000567372 442 ntBASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 AL590392.1-201ENST00000604960 446 ntBASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 AC090506.2-201ENST00000624521 419 ntBASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 Z82217.1-201ENST00000625157 8149 ntBASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 AC068254.2-201ENST00000623938 3577 ntBASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PTPN20Q4JDL3 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 AC097504.1-201ENST00000515103 2415 ntBASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 MAPK10-253ENST00000641010 4072 ntBASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 MIR365B-201ENST00000362317 111 ntBASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 SNORA60-201ENST00000362396 134 ntBASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 SNORD74.4-201ENST00000364129 80 ntBASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 SNORA62-201ENST00000365493 153 ntBASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 ENSAP1-201ENST00000392855 326 ntBASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 AL049693.1-201ENST00000402760 611 ntBASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 RNA5SP306-201ENST00000411087 107 ntBASIC4.26□□□□□ -1.73
PTPN20Q4JDL3 AC108032.1-201ENST00000416706 207 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms